RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 OR51F1A6NGY5 319 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 COX4I1P13073 169 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 ARSAP15289 507 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 ITGAXP20702 1163 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 HTR7P34969 479 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 ACVRL1P37023 503 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 CD151P48509 253 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 RPL14P50914 215 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 AP2B1P63010 937 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 CSHL1Q14406 222 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 PTPRCAPQ14761 206 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 CNPY1Q3B7I2 92 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 LSM12Q3MHD2 195 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 C10orf120Q5SQS8 335 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 PTAR1Q7Z6K3 402 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 DEFB107AQ8IZN7 70 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 DRAXINQ8NBI3 349 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 IMP4Q96G21 291 aaKnown RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 C8orf48Q96LL4 319 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 LENG8Q96PV6 779 aaPredicted RBP12.97□□□□□ -0.33
PRAME-213ENST00000492657 OLFM1Q99784 485 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 ZYG11BQ9C0D3 744 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 NDE1Q9NXR1 346 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 RAP2CQ9Y3L5 183 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 ACTL7AQ9Y615 435 aa12.97□□□□□ -0.33
PRAME-213ENST00000492657 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 RHOQP17081 205 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 GLDCP23378 1020 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 ARSDP51689 593 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 FAM189BP81408 668 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 PDCD2Q16342 344 aaPredicted RBP12.96□□□□□ -0.33
PRAME-213ENST00000492657 NFE2Q16621 373 aaPredicted RBP12.96□□□□□ -0.33
PRAME-213ENST00000492657 UGP2Q16851 508 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 RNF180Q86T96 592 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 TXNDC5Q8NBS9 432 aaKnown RBP12.96□□□□□ -0.33
PRAME-213ENST00000492657 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
PRAME-213ENST00000492657 PYDC1Q8WXC3 89 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 SEPT5Q99719 369 aaPredicted RBP12.96□□□□□ -0.33
PRAME-213ENST00000492657 SP110Q9HB58 689 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 CYP4F12Q9HCS2 524 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 FRMPD3Q5JV73 1810 aa12.96□□□□□ -0.33
PRAME-213ENST00000492657 AOC2O75106 756 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 APOA4P06727 396 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 KCNA5P22460 613 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 YWHAQP27348 245 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 RENBPP51606 427 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 NRG1Q02297 640 aaPredicted RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 MSLNQ13421 630 aaPredicted RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 HNRNPDQ14103 355 aaKnown RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 MGAT5BQ3V5L5 792 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 KIAA0930Q6ICG6 404 aaPredicted RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 HPS6Q86YV9 775 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 GIPC2Q8TF65 315 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 CMTM5Q96DZ9 223 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 GLT1D1Q96MS3 346 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 FAM96AQ9H5X1 160 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 SUDS3Q9H7L9 328 aaPredicted RBP12.96□□□□□ -0.34
PRAME-213ENST00000492657 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 MARCH2Q9P0N8 246 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.34
PRAME-213ENST00000492657 HDAC3O15379 428 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 VNN2O95498 520 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 LYNP07948 512 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 MYL4P12829 197 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 HNRNPLP14866 589 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRAME-213ENST00000492657 CPB1P15086 417 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 PAX3P23760 479 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 TCHHL1Q5QJ38 904 aaPredicted RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 RNF19BQ6ZMZ0 732 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 CFAP52Q8N1V2 620 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 GATA6Q92908 595 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 FUBP3Q96I24 572 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRAME-213ENST00000492657 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRAME-213ENST00000492657 TMEM248Q9NWD8 314 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 UXTQ9UBK9 157 aaPredicted RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 FIS1Q9Y3D6 152 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 AIM2O14862 343 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 MUSKO15146 869 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 RNASEH1O60930 286 aaKnown RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 NDST2P52849 883 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 PLK1P53350 603 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 INHBCP55103 352 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 ARRDC2Q8TBH0 407 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 HDAC10Q969S8 669 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 RPRD1AQ96P16 312 aaPredicted RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms