RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	MAT2A	P31153	395 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	MARCKSL1	P49006	195 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	PPID	Q08752	370 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	ELP6	Q0PNE2	266 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	KAZN	Q674X7	775 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	NAPEPLD	Q6IQ20	393 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	IL27RA	Q6UWB1	636 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZNF662	Q6ZS27	426 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	ADAT2	Q7Z6V5	191 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	CAMK1D	Q8IU85	385 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	P3H4	Q92791	437 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	POLR1E	Q9GZS1	481 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	NT5M	Q9NPB1	228 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	AASDHPPT	Q9NRN7	309 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	ANKRD36	A6QL64	1941 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	UPK3BL1	B0FP48	263 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	UPK3BL2	E5RIL1	263 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	GIPC1	O14908	333 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	AREL1	O15033	823 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	VILL	O15195	856 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	PLXNA2	O75051	1894 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ADRB1	P08588	477 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	CR2	P20023	1033 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	KCNA4	P22459	653 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	NFKBIA	P25963	317 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	CD38	P28907	300 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	PTPN7	P35236	360 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ABL2	P42684	1182 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	CSNK1E	P49674	416 aa	Known RBP	13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	PEX5	P50542	639 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	C21orf59	P57076	290 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	CCZ1B	P86790	482 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	CCZ1	P86791	482 aa	Predicted RBP	13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ITK	Q08881	620 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	AP1B1	Q10567	949 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	SGCG	Q13326	291 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	UGP2	Q16851	508 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZNF284	Q2VY69	593 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	TMEM259	Q4ZIN3	620 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ERAP2	Q6P179	960 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	NPNT	Q6UXI9	565 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	PGBD5	Q8N414	524 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ASB12	Q8WXK4	309 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	SPOCK2	Q92563	424 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	ECHDC3	Q96DC8	303 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	OLFM3	Q96PB7	478 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	LGMN	Q99538	433 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	GTPBP2	Q9BX10	602 aa	Known RBP	13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	EBF2	Q9HAK2	575 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	NOD2	Q9HC29	1040 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	GUCA1B	Q9UMX6	200 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451	PCDH15	Q96QU1	1955 aa		13.94	□□□□□ -0.18
PTPN7-215	ENST00000492451		A0A0U1RQJ8	604 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451		A0A1B0GVT2	93 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	MTSS1	O43312	755 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	MAGEC1	O60732	1142 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	CER1	O95813	267 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	HNRNPA2B1	P22626	353 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	CA4	P22748	312 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	AKT2	P31751	481 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	MAX	P61244	160 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	IFI35	P80217	286 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	OVGP1	Q12889	678 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	GRIK2	Q13002	908 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	STAT4	Q14765	748 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	CCDC181	Q5TID7	509 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	SEL1L3	Q68CR1	1132 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	ALG1L	Q6GMV1	187 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	BBS12	Q6ZW61	710 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	IQCH	Q86VS3	1027 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	MFSD2A	Q8NA29	543 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	FAM174A	Q8TBP5	190 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	CXorf40A	Q8TE69	158 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	SLC6A18	Q96N87	628 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	IL12RB2	Q99665	862 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	SEMA3C	Q99985	751 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	C1QTNF7	Q9BXJ2	289 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	C1QTNF2	Q9BXJ5	285 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	SLC17A9	Q9BYT1	436 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	OSBPL8	Q9BZF1	889 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	ZFR2	Q9UPR6	939 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	ANKRD6	Q9Y2G4	727 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	ATP8A1	Q9Y2Q0	1164 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	SLCO1B1	Q9Y6L6	691 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	ADAMTS9	Q9P2N4	1935 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	TRPM6	Q9BX84	2022 aa		13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	CNOT1	A5YKK6	2376 aa	Known RBP	13.93	□□□□□ -0.18
PTPN7-215	ENST00000492451	APOC4-APOC2	K7ER74	178 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	KCNK1	O00180	336 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	TRAFD1	O14545	582 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	RIOK3	O14730	519 aa	Known RBP	13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	SLC31A1	O15431	190 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	HTRA2	O43464	458 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	DFNA5	O60443	496 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	GJB3	O75712	270 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	TJP3	O95049	919 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	FTCD	O95954	541 aa		13.92	□□□□□ -0.18
PTPN7-215	ENST00000492451	JCHAIN	P01591	159 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms