RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 EFNA5P52803 228 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 CLDN2P57739 230 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 ZP1P60852 638 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 ITGADQ13349 1161 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 MAPRE1Q15691 268 aaKnown RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 HSPB2Q16082 182 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 GSTA3Q16772 222 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 DUSP6Q16828 381 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 OTUD1Q5VV17 481 aaPredicted RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 HAUS3Q68CZ6 603 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 ITIH6Q6UXX5 1313 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 PATL1Q86TB9 770 aaKnown RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 RBFAQ8N0V3 343 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 GJC3Q8NFK1 279 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 TMEM163Q8TC26 289 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 SMARCE1Q969G3 411 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 PIP5K1AQ99755 562 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 FAM234AQ9H0X4 552 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 RBM38Q9H0Z9 239 aaKnown RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 RANBP17Q9H2T7 1088 aaKnown RBP4.08□□□□□ -1.76
VTA1-204ENST00000491881 NDRG3Q9UGV2 375 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 A4GNTQ9UNA3 340 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 KDM3AQ9Y4C1 1321 aa4.08□□□□□ -1.76
VTA1-204ENST00000491881 A0A087X0M5 115 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 A0A1B0GX30 115 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 KDM4EB2RXH2 506 aaPredicted RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 EIF3CLB5ME19 914 aaKnown RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 SNAP23O00161 211 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 CHL1O00533 1208 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 BCAT2O15382 392 aaPredicted RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 LIASO43766 372 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 CCNDBP1O95273 360 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 CLEC3BP05452 202 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 ARSBP15848 533 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 SRD5A1P18405 259 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 BSGP35613 385 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 GABRB2P47870 512 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 GNAQP50148 359 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 P2RX3P56373 397 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 RPL7AP62424 266 aaKnown RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 GOLGA8DPQ0D2H9 430 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 LPIN1Q14693 890 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 RNPS1Q15287 305 aaKnown RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 TWIST1Q15672 202 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 ESCO2Q56NI9 601 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 DCAF6Q58WW2 860 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 TXNDC8Q6A555 127 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 LRRC8EQ6NSJ5 796 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 CDC73Q6P1J9 531 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 C1orf122Q6ZSJ8 110 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 GSTA5Q7RTV2 222 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 TDRPQ86YL5 185 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 ZCCHC9Q8N567 271 aaKnown RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 TEX45Q8NA69 505 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 APOLD1Q96LR9 279 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 MXRA8Q9BRK3 442 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 PRKRIP1Q9H875 184 aaPredicted RBP4.07□□□□□ -1.76
VTA1-204ENST00000491881 BPIFA1Q9NP55 256 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 DIAPH3Q9NSV4 1193 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 ANKRD10Q9NXR5 420 aa4.07□□□□□ -1.76
VTA1-204ENST00000491881 TDRD9Q8NDG6 1382 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 A0A1W2PQM1 296 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 NPIPB15A6NHN6 443 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 F5H0A9 414 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 VWA5AO00534 786 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 TNFRSF13BO14836 293 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 LDB2O43679 373 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 SEC31AO94979 1220 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 MT-CYBP00156 380 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 TFP02787 698 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 FGF2P09038 288 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 MYF6P23409 242 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 CDC25AP30304 524 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 RPS3AP61247 264 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 SIM2Q14190 667 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 TCTN1Q2MV58 587 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 DNTTIP2Q5QJE6 756 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 DAB2IPQ5VWQ8 1189 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 KIAA1161Q6NSJ0 714 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 C4orf50Q6ZRC1 276 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 TRILQ7L0X0 811 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 MON1BQ7L1V2 547 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 IRF2BP2Q7Z5L9 587 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 TBC1D1Q86TI0 1168 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 SFTPA2Q8IWL1 248 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 DHX40Q8IX18 779 aaKnown RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 MB21D2Q8IYB1 491 aaPredicted RBP4.06□□□□□ -1.76
VTA1-204ENST00000491881 CCDC105Q8IYK2 499 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 PARP16Q8N5Y8 322 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 MIGA1Q8NAN2 632 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 SMRP1Q8NCR6 262 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 NSMCE1Q8WV22 266 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 BRF2Q9HAW0 419 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 SMYD2Q9NRG4 433 aa4.06□□□□□ -1.76
VTA1-204ENST00000491881 MKLN1Q9UL63 735 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms