RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ISM2Q6H9L7 571 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 FOXR2Q6PJQ5 311 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 NYAP1Q6ZVC0 841 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 RD3Q7Z3Z2 195 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 TMPRSS9Q7Z410 1059 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 ZDHHC17Q8IUH5 632 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 SLITRK4Q8IW52 837 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 HAPLN3Q96S86 360 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 SLC12A9Q9BXP2 914 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 RNF215Q9Y6U7 377 aa13.8□□□□□ -0.2
CTDSP1-210ENST00000491064 UTP20O75691 2785 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 POP4O95707 220 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 PNLIPP16233 465 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 GLB1P16278 677 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 ITIH2P19823 946 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 SRP54P61011 504 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 FOXK1P85037 733 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 NFATC4Q14934 902 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 POLD3Q15054 466 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 MYLK3Q32MK0 819 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 CERCAMQ5T4B2 595 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 ATXN7L2Q5T6C5 722 aaPredicted RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 KCTD16Q68DU8 428 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 BORAQ6PGQ7 559 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 ENPP7Q6UWV6 458 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 GDPD4Q6W3E5 623 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 SHC3Q92529 594 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 B3GNT4Q9C0J1 378 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 NDFIP2Q9NV92 336 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 COQ6Q9Y2Z9 468 aa13.79□□□□□ -0.2
CTDSP1-210ENST00000491064 ICE1Q9Y2F5 2266 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 GNA14O95837 355 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 TIMP2P16035 220 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 HTR1BP28222 390 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 ETFBP38117 255 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 PPP1R2P41236 205 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 POLE2P56282 527 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 GEMIN4P57678 1058 aaKnown RBP13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 APBA1Q02410 837 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 KCNAB2Q13303 367 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 C16orf72Q14CZ0 275 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 LRRC14Q15048 493 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 IGFBP7Q16270 282 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 PHF19Q5T6S3 580 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 OGFOD3Q6PK18 319 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 JPH3Q8WXH2 748 aaPredicted RBP13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 PDXPQ96GD0 296 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 RBM15Q96T37 977 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■□□ 15.5
CTDSP1-210ENST00000491064 CRACR2AQ9BSW2 395 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 APOOQ9BUR5 198 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 KLQ9UEF7 1012 aa13.78□□□□□ -0.2
CTDSP1-210ENST00000491064 BICDL2A1A5D9 508 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 STMND1H3BQB6 276 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 SLC9A1P19634 815 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 KRT9P35527 623 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 FLT3P36888 993 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 CASRP41180 1078 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 PTK2Q05397 1052 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 INPP5AQ14642 412 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 FAM102AQ5T9C2 384 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 TMEM164Q5U3C3 297 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 LEKR1Q6ZMV7 388 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 FAM131BQ86XD5 332 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 DKK3Q9UBP4 350 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 TUBD1Q9UJT1 453 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 CTNND2Q9UQB3 1225 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 MAN2B2Q9Y2E5 1009 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 OR1A2Q9Y585 309 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 DGKBQ9Y6T7 804 aa13.77□□□□□ -0.21
CTDSP1-210ENST00000491064 TNFP01375 233 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 CCL4P13236 92 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 BMP6P22004 513 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 SCNN1AP37088 669 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 GABRB2P47870 512 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 MAPKAPK2P49137 400 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 ARSDP51689 593 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 STX17P56962 302 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 SERINC3Q13530 473 aa13.76□□□□□ -0.21
CTDSP1-210ENST00000491064 ARHGEF7Q14155 803 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms