RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PIAS2O75928 621 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 PROSCO94903 275 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 DKK1O94907 266 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 CKMT2P17540 419 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 DGKAP23743 735 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 SCNN1BP51168 640 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 POLR2LP62875 67 aaKnown RBP17.61■□□□□ 0.41
SEC13-218ENST00000490283 TMEM52BQ4KMG9 183 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 TMPRSS7Q7RTY8 843 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 CAMK1DQ8IU85 385 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 CNGA4Q8IV77 575 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 MAP7D3Q8IWC1 876 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 SLC22A18ASQ8N1D0 253 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 ZCCHC14Q8WYQ9 949 aaKnown RBP17.61■□□□□ 0.41
SEC13-218ENST00000490283 VOPP1Q96AW1 172 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 PSKH2Q96QS6 385 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 KLF6Q99612 283 aaPredicted RBP17.61■□□□□ 0.41
SEC13-218ENST00000490283 PCDH12Q9NPG4 1184 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 EVA1BQ9NVM1 165 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 ATP8A1Q9Y2Q0 1164 aa17.61■□□□□ 0.41
SEC13-218ENST00000490283 SPTY2D1-AS1A0A0U1RR47 76 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.6■□□□□ 0.41
SEC13-218ENST00000490283 MFAP3LO75121 409 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 KRT7P08729 469 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 TMEM253P0C7T8 217 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 NFKBIAP25963 317 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 HNF1BP35680 557 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 RGRP47804 291 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 DAB2P98082 770 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 DNAJC3Q13217 504 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 ZNF211Q13398 564 aaPredicted RBP17.6■□□□□ 0.41
SEC13-218ENST00000490283 TXNRD3NBQ6F5E7 133 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 DHRS13Q6UX07 377 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 CCNI2Q6ZMN8 369 aaPredicted RBP17.6■□□□□ 0.41
SEC13-218ENST00000490283 KANSL1Q7Z3B3 1105 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 LRRC49Q8IUZ0 686 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 KDF1Q8NAX2 398 aaPredicted RBP17.6■□□□□ 0.41
SEC13-218ENST00000490283 KCTD6Q8NC69 237 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 TMEM121BQ9BXQ6 578 aaPredicted RBP17.6■□□□□ 0.41
SEC13-218ENST00000490283 GPR27Q9NS67 375 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 HAUS2Q9NVX0 235 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 NENFQ9UMX5 172 aa17.6■□□□□ 0.41
SEC13-218ENST00000490283 TRPM6Q9BX84 2022 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 A0A1W2PQ67 120 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 RIOK3O14730 519 aaKnown RBP17.59■□□□□ 0.41
SEC13-218ENST00000490283 FFAR2O15552 330 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 LZTS3O60299 673 aaPredicted RBP17.59■□□□□ 0.41
SEC13-218ENST00000490283 BUB1BO60566 1050 aaPredicted RBP17.59■□□□□ 0.41
SEC13-218ENST00000490283 CSF2P04141 144 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 NME1P15531 152 aaKnown RBP17.59■□□□□ 0.41
SEC13-218ENST00000490283 ACADVLP49748 655 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 PFN3P60673 137 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 YPEL5P62699 121 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 SLC10A7Q0GE19 358 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 ILKQ13418 452 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 FZD2Q14332 565 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 LRRC14Q15048 493 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 PDK2Q15119 407 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 ZNF542PQ5EBM4 170 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 OR4C6Q8NH72 309 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 BTN2A2Q8WVV5 523 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 CENPTQ96BT3 561 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 DUSP23Q9BVJ7 150 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 PACSIN1Q9BY11 444 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 SCUBE2Q9NQ36 999 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 NLGN3Q9NZ94 848 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 ZMIZ1Q9ULJ6 1067 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 EPG5Q9HCE0 2579 aa17.59■□□□□ 0.41
SEC13-218ENST00000490283 TP53BP1Q12888 1972 aaPredicted RBP17.59■□□□□ 0.41
SEC13-218ENST00000490283 COL5A1P20908 1838 aaPredicted RBP17.58■□□□□ 0.41
SEC13-218ENST00000490283 TMEM110-MUSTN1A8MSY1 372 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 AKR1B15C9JRZ8 316 aaPredicted RBP17.58■□□□□ 0.4
SEC13-218ENST00000490283 SIGLEC6O43699 453 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 MAFKO60675 156 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 NEBLO76041 1014 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 C6P13671 934 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 ITIH2P19823 946 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 MAN1A1P33908 653 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 IGFALSP35858 605 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 MMP12P39900 470 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 ADKP55263 362 aaKnown RBP17.58■□□□□ 0.4
SEC13-218ENST00000490283 SMAD1Q15797 465 aaKnown RBP17.58■□□□□ 0.4
SEC13-218ENST00000490283 ASTE1Q2TB18 679 aaPredicted RBP17.58■□□□□ 0.4
SEC13-218ENST00000490283 MARC1Q5VT66 337 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 TMPRSS12Q86WS5 348 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 TP53INP2Q8IXH6 220 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 RHOT2Q8IXI1 618 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 SLC25A45Q8N413 288 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 TSC1Q92574 1164 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 ZNF670Q9BS34 389 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 TRIM5Q9C035 493 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 NHEJ1Q9H9Q4 299 aaPredicted RBP17.58■□□□□ 0.4
SEC13-218ENST00000490283 UCKL1Q9NWZ5 548 aa17.58■□□□□ 0.4
SEC13-218ENST00000490283 MAP1BP46821 2468 aaKnown RBP17.57■□□□□ 0.4
SEC13-218ENST00000490283 CFAP69A5D8W1 941 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 TRIM38O00635 465 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 SCAMP1O15126 338 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 SOCS5O75159 536 aa17.57■□□□□ 0.4
SEC13-218ENST00000490283 ELFN1P0C7U0 828 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms