RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 H3BNX3 289 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 I6L893 689 aaPredicted RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 LDB2O43679 373 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 SEC31AO94979 1220 aaKnown RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 CCNDBP1O95273 360 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 MT-CYBP00156 380 aaPredicted RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 GNLYP22749 145 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 MYF6P23409 242 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ICAM3P32942 547 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 HDAC4P56524 1084 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 CCNG2Q16589 344 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ESCO2Q56NI9 601 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 DCAF6Q58WW2 860 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PRAMEF19Q5SWL8 479 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 OTUD1Q5VV17 481 aaPredicted RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 LRRC8EQ6NSJ5 796 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ZCCHC9Q8N567 271 aaKnown RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 ANKRD52Q8NB46 1076 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 GPT2Q8TD30 523 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 SNAPC3Q92966 411 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 VCPIP1Q96JH7 1222 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 APOLD1Q96LR9 279 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PLEKHA4Q9H4M7 779 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PLAC1Q9HBJ0 212 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 SMYD2Q9NRG4 433 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 KRT84Q9NSB2 600 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 DIAPH3Q9NSV4 1193 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 INTS6Q9UL03 887 aaKnown RBP4.09□□□□□ -1.75
CD46-216ENST00000490278 SQORQ9Y6N5 450 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 CAPN7Q9Y6W3 813 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PIAS3Q9Y6X2 628 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 A3GALT2U3KPV4 340 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 EIF3CLB5ME19 914 aaKnown RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 IFNL4K9M1U5 179 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 BCAT2O15382 392 aaPredicted RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 MTA2O94776 668 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 RGS11O94810 467 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 SCGB1D1O95968 90 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 HOXB5P09067 269 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 CBSLP0DN79 551 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 HOXB2P14652 356 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 CBSP35520 551 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 THPOP40225 353 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 EIF5P55010 431 aaKnown RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 OLR1P78380 273 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 SETQ01105 290 aaPredicted RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 TMEM115Q12893 351 aaPredicted RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 GRIK3Q13003 919 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 ITGADQ13349 1161 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 SOWAHAQ2M3V2 549 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 TCTN1Q2MV58 587 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 ZNF284Q2VY69 593 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 LEXMQ3ZCV2 418 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 GPATCH4Q5T3I0 446 aaKnown RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 Q6ZSV7 163 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 MON1BQ7L1V2 547 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 PXKQ7Z7A4 578 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 TDRPQ86YL5 185 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 SFTPA2Q8IWL1 248 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 MB21D2Q8IYB1 491 aaPredicted RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 ADSSL1Q8N142 457 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 NGEFQ8N5V2 710 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 PARP16Q8N5Y8 322 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 SMARCE1Q969G3 411 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 FAM149B1Q96BN6 582 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 INTS12Q96CB8 462 aaKnown RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 URB1-AS1Q96HZ7 61 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 FCRL4Q96PJ5 515 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 BPIFA1Q9NP55 256 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 BLOC1S4Q9NUP1 217 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 LIMA1Q9UHB6 759 aaKnown RBP4.08□□□□□ -1.76
CD46-216ENST00000490278 HAO1Q9UJM8 370 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 MKLN1Q9UL63 735 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 PSAT1Q9Y617 370 aa4.08□□□□□ -1.76
CD46-216ENST00000490278 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 UTYO14607 1347 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 BECN2A8MW95 431 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 KDM4EB2RXH2 506 aaPredicted RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 SNAP23O00161 211 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 VWA5AO00534 786 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 TNFRSF13BO14836 293 aaPredicted RBP4.07□□□□□ -1.76
CD46-216ENST00000490278 SEC14L5O43304 696 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 LIASO43766 372 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 KLK8O60259 260 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 LCATP04180 440 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 LAMP2P13473 410 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 ETFAP13804 333 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 AGAP20933 346 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 CDAP32320 146 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 ARL3P36405 182 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 CASP2P42575 452 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 RFX2P48378 723 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 ADORA2A-AS1P86434 159 aa4.07□□□□□ -1.76
CD46-216ENST00000490278 ST3GAL1Q11201 340 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms