RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 PSKH2Q96QS6 385 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 PCDH12Q9NPG4 1184 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 DNAJC28Q9NX36 388 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 TOR4AQ9NXH8 423 aa18■□□□□ 0.47
ABCF3-217ENST00000489719 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.99■□□□□ 0.47
ABCF3-217ENST00000489719 TSPAN11A1L157 253 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 NEMP2A6NFY4 417 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 TMEM110-MUSTN1A8MSY1 372 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 RIOK3O14730 519 aaKnown RBP17.99■□□□□ 0.47
ABCF3-217ENST00000489719 SPINT1O43278 529 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 C1SP09871 688 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 CDK4P11802 303 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 DGKAP23743 735 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 IL4RP24394 825 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 HSPA9P38646 679 aaKnown RBP17.99■□□□□ 0.47
ABCF3-217ENST00000489719 AP1S1P61966 158 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 HNRNPKP61978 463 aaKnown RBP eCLIP17.99■□□□□ 0.47
ABCF3-217ENST00000489719 MMRN1Q13201 1228 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 PTK2BQ14289 1009 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 MESDQ14696 234 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 ZNF542PQ5EBM4 170 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 MARC1Q5VT66 337 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 GALNT15Q8N3T1 639 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 SLC25A45Q8N413 288 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 SLC35G2Q8TBE7 412 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 FAM71BQ8TC56 605 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
ABCF3-217ENST00000489719 SPTY2D1-AS1A0A0U1RR47 76 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-217ENST00000489719 MAFKO60675 156 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 DKK1O94907 266 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 CD48P09326 243 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 THOP1P52888 689 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 YPEL5P62699 121 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 PDE1CQ14123 709 aaPredicted RBP17.98■□□□□ 0.47
ABCF3-217ENST00000489719 SARM1Q6SZW1 724 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 TMPRSS7Q7RTY8 843 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 KANSL1Q7Z3B3 1105 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 SLC22A18ASQ8N1D0 253 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 GATA6Q92908 595 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 SCUBE2Q9NQ36 999 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 SPTLC3Q9NUV7 552 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 ATP8A1Q9Y2Q0 1164 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 PCDHGA1Q9Y5H4 931 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 PLXNA2O75051 1894 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 CABIN1Q9Y6J0 2220 aa17.98■□□□□ 0.47
ABCF3-217ENST00000489719 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 TMEM8BA6NDV4 472 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 H3BM21 787 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 TOR1BO14657 336 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 MUSKO15146 869 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 PIAS2O75928 621 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 ALPPL2P10696 532 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 CKMT2P17540 419 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 MAN1A1P33908 653 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 ARHGAP25P42331 645 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 LIG3P49916 1009 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 ARSEP51690 589 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 TAS2R40P59535 323 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 PFN3P60673 137 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 DNAJC3Q13217 504 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 ZNF211Q13398 564 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-217ENST00000489719 DPYSL3Q14195 570 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 FZD2Q14332 565 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 LRRC14Q15048 493 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 ANKRD20A8PQ5CZ79 823 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
ABCF3-217ENST00000489719 PARGQ86W56 976 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 RHOT2Q8IXI1 618 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 UCKL1Q9NWZ5 548 aa17.97■□□□□ 0.47
ABCF3-217ENST00000489719 TPRP12270 2363 aaKnown RBP17.97■□□□□ 0.47
ABCF3-217ENST00000489719 FFAR2O15552 330 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 SIGLEC6O43699 453 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 CSF2P04141 144 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 PRKCGP05129 697 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 NFKBIAP25963 317 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 MMP13P45452 471 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 ITKQ08881 620 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 TBX2Q13207 712 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-217ENST00000489719 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
ABCF3-217ENST00000489719 DHRS13Q6UX07 377 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 CPNE8Q86YQ8 564 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 KDF1Q8NAX2 398 aaPredicted RBP17.96■□□□□ 0.47
ABCF3-217ENST00000489719 PCDH19Q8TAB3 1148 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 BTN2A2Q8WVV5 523 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 ECHDC3Q96DC8 303 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 NUDCD1Q96RS6 583 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 ZNF670Q9BS34 389 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 MBNL1Q9NR56 388 aaKnown RBP17.96■□□□□ 0.47
ABCF3-217ENST00000489719 GPR27Q9NS67 375 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 COQ6Q9Y2Z9 468 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 PCDHGC4Q9Y5F7 938 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 NYNRINQ9P2P1 1898 aaKnown RBP17.96■□□□□ 0.47
ABCF3-217ENST00000489719 ACACBO00763 2458 aa17.96■□□□□ 0.47
ABCF3-217ENST00000489719 CHD5Q8TDI0 1954 aa17.95■□□□□ 0.46
ABCF3-217ENST00000489719 TTC24A2A3L6 582 aaPredicted RBP17.95■□□□□ 0.46
ABCF3-217ENST00000489719 CFAP69A5D8W1 941 aa17.95■□□□□ 0.46
ABCF3-217ENST00000489719 TRIM38O00635 465 aa17.95■□□□□ 0.46
ABCF3-217ENST00000489719 SCAMP1O15126 338 aa17.95■□□□□ 0.46
ABCF3-217ENST00000489719 RFPL3O75679 317 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms