RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 KLHL40Q2TBA0 621 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 DPCR1Q3MIW9 517 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 CFAP58Q5T655 872 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 INO80CQ6PI98 192 aaPredicted RBP9.47□□□□□ -0.89
SNX17-207ENST00000489402 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 TRIM72Q6ZMU5 477 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 CCDC81Q6ZN84 652 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 SLFN11Q7Z7L1 901 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 HID1Q8IV36 788 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 CCDC185Q8N715 623 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 ARL10Q8N8L6 244 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 TP53I13Q8NBR0 393 aaPredicted RBP9.47□□□□□ -0.89
SNX17-207ENST00000489402 ATL2Q8NHH9 583 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 JOSD2Q8TAC2 188 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 SLC30A5Q8TAD4 765 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 NTAN1Q96AB6 310 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 GFM1Q96RP9 751 aaKnown RBP9.47□□□□□ -0.89
SNX17-207ENST00000489402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNX17-207ENST00000489402 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 STRADBQ9C0K7 418 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 CLSTN2Q9H4D0 955 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 MBNL1Q9NR56 388 aaKnown RBP9.47□□□□□ -0.89
SNX17-207ENST00000489402 WDR70Q9NW82 654 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 SIRPGQ9P1W8 387 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 DKK3Q9UBP4 350 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 GULP1Q9UBP9 304 aa9.47□□□□□ -0.89
SNX17-207ENST00000489402 NOCTQ9UK39 431 aaKnown RBP9.47□□□□□ -0.89
SNX17-207ENST00000489402 RP1P56715 2156 aa9.46□□□□□ -0.89
SNX17-207ENST00000489402 PLD2O14939 933 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 C6P13671 934 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 DESP17661 470 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 CHRNB2P17787 502 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 GPD1P21695 349 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 SOX5P35711 763 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 HK3P52790 923 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 HDAC4P56524 1084 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 YBEYP58557 167 aaPredicted RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 POLR2FP61218 127 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 SKOR1P84550 965 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 FMO1Q01740 532 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 EIF3IQ13347 325 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 SYCP1Q15431 976 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 PARP15Q460N3 678 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 TMEM52BQ4KMG9 183 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 INO80DQ53TQ3 878 aaPredicted RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 TCP11X2Q5H9J9 407 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 FKBP15Q5T1M5 1219 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 RD3Q7Z3Z2 195 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 CLEC14AQ86T13 490 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 GKN2Q86XP6 184 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 RTL3Q8N8U3 475 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 KYQ8NBH2 561 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 PCDH19Q8TAB3 1148 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 TTC9Q92623 222 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 CENPIQ92674 756 aaPredicted RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 MED8Q96G25 268 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 LIN37Q96GY3 246 aaPredicted RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 PRR11Q96HE9 360 aaPredicted RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 CPEB1Q9BZB8 566 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 EDEM3Q9BZQ6 932 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 CLPBQ9H078 707 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 KLC2Q9H0B6 622 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 GANQ9H2C0 597 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 CATSPERBQ9H7T0 1116 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 EPB41L5Q9HCM4 733 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 SAMSN1Q9NSI8 373 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 TAB2Q9NYJ8 693 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 ADAM22Q9P0K1 906 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 GPR34Q9UPC5 381 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 NEU3Q9UQ49 428 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 MFHAS1Q9Y4C4 1052 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 DAAM1Q9Y4D1 1078 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.9
SNX17-207ENST00000489402 LRP4O75096 1905 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.9
SNX17-207ENST00000489402 LRRK1Q38SD2 2015 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 B8ZZF3 427 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 RASA4BC9J798 803 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 PYCARD-AS1I3L0S3 204 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 EPHB6O15197 1021 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 RASA4O43374 803 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 CREB3O43889 395 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 CALB1P05937 261 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 CELA2BP08218 269 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 TIMP2P16035 220 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 RFC1P35251 1148 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 STAT1P42224 750 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 PDX1P52945 283 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 GSCP56915 257 aaPredicted RBP9.45□□□□□ -0.9
SNX17-207ENST00000489402 CLN3Q13286 438 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 SERINC3Q13530 473 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 NFATC4Q14934 902 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 TCEA2Q15560 299 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 ALG11Q2TAA5 492 aa9.45□□□□□ -0.9
SNX17-207ENST00000489402 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms