RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 BRWD1-AS2P59051 145 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 ERVFC1-1P60608 527 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 EEF1A2Q05639 463 aaKnown RBP3.78□□□□□ -1.8
RFC4-213ENST00000489028 MYBPHQ13203 477 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 RUNX2Q13950 521 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 DCAF6Q58WW2 860 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 ZNF766Q5HY98 468 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 SLC22A25Q6T423 547 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 H1FNTQ75WM6 255 aaPredicted RBP3.78□□□□□ -1.8
RFC4-213ENST00000489028 TBC1D26Q86UD7 250 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 KIAA2013Q8IYS2 634 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 TCP11L2Q8N4U5 519 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 SNAPC3Q92966 411 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 ZBTB10Q96DT7 871 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 SLITRK1Q96PX8 696 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 HEMGNQ9BXL5 484 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 NUF2Q9BZD4 464 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 GPR63Q9BZJ6 419 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 DDX31Q9H8H2 851 aaKnown RBP3.78□□□□□ -1.8
RFC4-213ENST00000489028 ZNF556Q9HAH1 456 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 NOX4Q9NPH5 578 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 PLSCR4Q9NRQ2 329 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 RRN3Q9NYV6 651 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
RFC4-213ENST00000489028 PLSCR5A0PG75 271 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 HSPA12AO43301 675 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 HSD3B1P14060 373 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 ZNF8P17098 575 aaPredicted RBP3.77□□□□□ -1.81
RFC4-213ENST00000489028 PTPN2P17706 415 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 GAS1P54826 345 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 YWHAZP63104 245 aaKnown RBP3.77□□□□□ -1.81
RFC4-213ENST00000489028 EFNB1P98172 346 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.77□□□□□ -1.81
RFC4-213ENST00000489028 GRIK3Q13003 919 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 EFNB3Q15768 340 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 TAF12Q16514 161 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 NFIL3Q16649 462 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 XKR9Q5GH70 373 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 SERTAD4-AS1Q5TG53 156 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 SHFQ7M4L6 423 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 GPAT4Q86UL3 456 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 SCMH1Q96GD3 660 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 MAELQ96JY0 434 aaKnown RBP3.77□□□□□ -1.81
RFC4-213ENST00000489028 SCLT1Q96NL6 688 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 DDX4Q9NQI0 724 aaKnown RBP3.77□□□□□ -1.81
RFC4-213ENST00000489028 IL1RAPL1Q9NZN1 696 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 KIAA1456Q9P272 454 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 SLC9A2Q9UBY0 812 aa3.77□□□□□ -1.81
RFC4-213ENST00000489028 GOLGA6L10A0A0M3HER8 536 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 CPED1A4D0V7 1026 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 TEX22C9J3V5 150 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 TACC1O75410 805 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 DDNO94850 711 aaPredicted RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 HEXAP06865 529 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 HNRNPA1P09651 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
RFC4-213ENST00000489028 PSMC2P35998 433 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 GGT5P36269 586 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 PGM1P36871 562 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 GPD2P43304 727 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 NR1H2P55055 460 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 CDH15P55291 814 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 HDAC4P56524 1084 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 RPL36AP83881 106 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 ARHGEF6Q15052 776 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.814e-9■■■□□ 17.3
RFC4-213ENST00000489028 KIF19Q2TAC6 998 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 FAM76BQ5HYJ3 339 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 PAPPA-AS1Q5QFB9 102 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 TMEM81Q6P7N7 255 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 SPSB3Q6PJ21 355 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 RHBDF2Q6PJF5 856 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 LRRC8DQ7L1W4 858 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 TADA2BQ86TJ2 420 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 NR2C2APQ86WQ0 139 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 TNIP2Q8NFZ5 429 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 ZC3HAV1LQ96H79 300 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 ADGRG7Q96K78 797 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 CSF3RQ99062 836 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 PKP4Q99569 1192 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 MXRA8Q9BRK3 442 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 INTS2Q9H0H0 1204 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 BEX4Q9NWD9 120 aaPredicted RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 BABAM1Q9NWV8 329 aa3.76□□□□□ -1.81
RFC4-213ENST00000489028 SLC25A10Q9UBX3 287 aaPredicted RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 CNOT7Q9UIV1 285 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 TCF20Q9UGU0 1960 aaKnown RBP3.76□□□□□ -1.81
RFC4-213ENST00000489028 SCN5AQ14524 2016 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 A0A087WYN8 130 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 hDV102S1A0JD36 115 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 WNT9BO14905 357 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 LDLRAD4O15165 306 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 ZIC3O60481 467 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 GALTP07902 379 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 IGHV4-30-4P0DP06 118 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 TLE2Q04725 743 aa3.75□□□□□ -1.81
RFC4-213ENST00000489028 ILF3Q12906 894 aaKnown RBP eCLIP3.75□□□□□ -1.81
RFC4-213ENST00000489028 DLG1Q12959 904 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms