RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CAP2P40123 477 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 MLLT3P42568 568 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-229ENST00000488765 NAMPTP43490 491 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CA9Q16790 459 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CYP51A1Q16850 503 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 MFSD14AQ96MC6 490 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 KCNH7Q9NS40 1196 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 USP22Q9UPT9 525 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 DNAH12Q6ZR08 3092 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 DHRS12A0PJE2 317 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 AP3D1O14617 1153 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 MRASO14807 208 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 SNX2O60749 519 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 AGXTP21549 392 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 OSTNP61366 133 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 NOMO1Q15155 1222 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 MEP1AQ16819 746 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 GEN1Q17RS7 908 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CYBRD1Q53TN4 286 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 XAF1Q6GPH4 301 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 DESI1Q6ICB0 168 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 NEK10Q6ZWH5 1172 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CYP2U1Q7Z449 544 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 THNSL1Q8IYQ7 743 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 FAM83FQ8NEG4 500 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CDKL2Q92772 493 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF641Q96N77 438 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-229ENST00000488765 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 IMPG2Q9BZV3 1241 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 UCKL1Q9NWZ5 548 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 BAG5Q9UL15 447 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 GCATO75600 419 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 CAPNS1P04632 268 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 YWHAQP27348 245 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 FASTKQ14296 549 aaKnown RBP16.3■□□□□ 0.2
MCF2L-229ENST00000488765 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 FSTL4Q6MZW2 842 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 ERMP1Q7Z2K6 904 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 BNIPLQ7Z465 357 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 OSTM1Q86WC4 334 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 UBA3Q8TBC4 463 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 PMEPA1Q969W9 287 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 ZUFSPQ96AP4 578 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 NACC2Q96BF6 587 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 TMEM246Q9BRR3 403 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 C2orf40Q9H1Z8 148 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 FAM96AQ9H5X1 160 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 MYOZ2Q9NPC6 264 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 PMF1-BGLAPU3KQ54 211 aa16.3■□□□□ 0.2
MCF2L-229ENST00000488765 NUAK1O60285 661 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 GPC4O75487 556 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 DAB1O75553 588 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 RFPL2O75678 378 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 UGT2B4P06133 528 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 C2P06681 752 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 MBL2P11226 248 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 FASP25445 335 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 NCS1P62166 190 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 TFAMQ00059 246 aaKnown RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 ZACNQ401N2 412 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 FAM102AQ5T9C2 384 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 CYP20A1Q6UW02 462 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 SMG8Q8ND04 991 aaKnown RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 RXFP2Q8WXD0 754 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 B3GNT3Q9Y2A9 372 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 A8MX80 341 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 TADA2AO75478 443 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 COLEC12Q5KU26 742 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 SCML4Q8N228 414 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
MCF2L-229ENST00000488765 EGLN2Q96KS0 407 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 MOCS1Q9NZB8 636 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 LY75O60449 1722 aa16.29■□□□□ 0.2
MCF2L-229ENST00000488765 C4BPAP04003 597 aaKnown RBP16.28■□□□□ 0.2
MCF2L-229ENST00000488765 CAPN1P07384 714 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 TSHRP16473 764 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 PTPN2P17706 415 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 TTKP33981 857 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 MYL6P60660 151 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 ZCCHC8Q6NZY4 707 aaKnown RBP16.28■□□□□ 0.2
MCF2L-229ENST00000488765 ZBTB33Q86T24 672 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 GRAMD2AQ8IUY3 354 aa16.28■□□□□ 0.2
MCF2L-229ENST00000488765 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms