RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PPHLN1Q8NEY8 458 aaKnown RBP12.85□□□□□ -0.35
NELFE-209ENST00000488426 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 MTBPQ96DY7 904 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 ALG14Q96F25 216 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 CERS2Q96G23 380 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 FEM1CQ96JP0 617 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 SMC6Q96SB8 1091 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
NELFE-209ENST00000488426 TRABDQ9H4I3 376 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 ARHGEF3Q9NR81 526 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 SMYD2Q9NRG4 433 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.85□□□□□ -0.35
NELFE-209ENST00000488426 TBC1D14Q9P2M4 693 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 VPS28Q9UK41 221 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
NELFE-209ENST00000488426 MYLKQ15746 1914 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 CXorf51AA0A1B0GTR3 108 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 ZCWPW2A0A1B0GU75 182 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 LOC285095A0A1B0GVY8 99 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 MUSKO15146 869 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 PRPF4O43172 522 aaKnown RBP eCLIP12.84□□□□□ -0.35
NELFE-209ENST00000488426 PIAS1O75925 651 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 FAM155BO75949 473 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 KRT38O76015 456 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 SERPINF2P08697 491 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 CHN1P15882 459 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 TPH1P17752 444 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 CNTFP26441 200 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 WEE1P30291 646 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 CSKP41240 450 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 SLC18A1P54219 525 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 ARF5P84085 180 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 ZNF77Q15935 545 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 PCSK7Q16549 785 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 FYB2Q5VWT5 728 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 VITQ6UXI7 678 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 FIBINQ8TAL6 211 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 ALKBH8Q96BT7 664 aaKnown RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 OTUB2Q96DC9 234 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 FCRL3Q96P31 734 aaPredicted RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 RANBP9Q96S59 729 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 KIF9Q9HAQ2 790 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 KIAA1522Q9P206 1035 aaPredicted RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 TCAF1Q9Y4C2 921 aa12.84□□□□□ -0.35
NELFE-209ENST00000488426 RIF1Q5UIP0 2472 aaKnown RBP12.84□□□□□ -0.35
NELFE-209ENST00000488426 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 ECI2O75521 394 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 CR2P20023 1033 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 HLA-DPA1P20036 260 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 PTPRZ1P23471 2315 aaPredicted RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 ADRA1DP25100 572 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 LSP1P33241 339 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 CYTH1Q15438 398 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 SLC1A5Q15758 541 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 MTSS1LQ765P7 747 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 ZNF557Q8N988 423 aaPredicted RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 ACDQ96AP0 544 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 KCNH6Q9H252 994 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 CHRAC1Q9NRG0 131 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
NELFE-209ENST00000488426 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
NELFE-209ENST00000488426 FOXO6A8MYZ6 492 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 TMCC1O94876 653 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 MT-ND3P03897 115 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 FGF1P05230 155 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CREB1P16220 341 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SERPINH1P50454 418 aaKnown RBP12.82□□□□□ -0.36
NELFE-209ENST00000488426 PLK1P53350 603 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 IHHQ14623 411 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 POU6F1Q14863 301 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 RALGPS1Q5JS13 557 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 RETSATQ6NUM9 610 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 CES3Q6UWW8 571 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 TPGS1Q6ZTW0 290 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 ELSPBP1Q96BH3 223 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 MFSD3Q96ES6 412 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 NUDCD1Q96RS6 583 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 ZFP14Q9HCL3 533 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 NKIRAS1Q9NYS0 192 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 DLGAP2Q9P1A6 1054 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
NELFE-209ENST00000488426 A0A1W2PPM1 405 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms