RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SLC20A1Q8WUM9 679 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 IRGQQ8WZA9 623 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 SHC3Q92529 594 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 GOLGA1Q92805 767 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 TOE1Q96GM8 510 aaKnown RBP6.1□□□□□ -1.43
CDHR3-213ENST00000488386 SLC39A13Q96H72 371 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 PPP1R13BQ96KQ4 1090 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 TUBGCP2Q9BSJ2 902 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 GTPBP2Q9BX10 602 aaKnown RBP6.1□□□□□ -1.43
CDHR3-213ENST00000488386 GPR174Q9BXC1 333 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 RAB6CQ9H0N0 254 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 VPS16Q9H269 839 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 NDST4Q9H3R1 872 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 THAP9Q9H5L6 903 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 FAM124BQ9H5Z6 455 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-213ENST00000488386 FAM204AQ9H8W3 233 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 PRDM16Q9HAZ2 1276 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 ANLNQ9NQW6 1124 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 INTS6Q9UL03 887 aaKnown RBP6.1□□□□□ -1.43
CDHR3-213ENST00000488386 SLC27A6Q9Y2P4 619 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 PCDHGA5Q9Y5G8 931 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 NYNRINQ9P2P1 1898 aaKnown RBP6.1□□□□□ -1.43
CDHR3-213ENST00000488386 PI4KAP42356 2102 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 LAMA1P25391 3075 aa6.1□□□□□ -1.43
CDHR3-213ENST00000488386 PCDH15Q96QU1 1955 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ZC3H12DA2A288 527 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 GOLGA8SH3BPF8 625 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 PLK4O00444 970 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 IRAK2O43187 625 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 AP5Z1O43299 807 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 MED7O43513 233 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SYNCRIPO60506 623 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NDUFS2O75306 463 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 FBXO21O94952 628 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 KCNK5O95279 499 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ADRB1P08588 477 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ENGP17813 658 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 TACR2P21452 398 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 VIPR1P32241 457 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 CSKP41240 450 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ACADSBP45954 432 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SLC11A2P49281 568 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 STK19P49842 368 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NOVA1P51513 510 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 TPMTP51580 245 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 RNASE9P60153 205 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NME3Q13232 169 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ENPP2Q13822 863 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 DRAP1Q14919 205 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 TCP11X2Q5H9J9 407 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 MS4A13Q5J8X5 152 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 KLHDC7AQ5VTJ3 777 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 OTUD1Q5VV17 481 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 C14orf80Q86SX3 495 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 TMEM110Q86TL2 294 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NOP9Q86U38 636 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 DHX40Q8IX18 779 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 AHI1Q8N157 1196 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 ZCCHC9Q8N567 271 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 FBXO15Q8NCQ5 510 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 DEFB124Q8NES8 71 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 OR52K2Q8NGK3 314 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 UCMAQ8WVF2 138 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SNX19Q92543 992 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 IGSF8Q969P0 613 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SIPA1Q96FS4 1042 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 LMLNQ96KR4 655 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 RPL10LQ96L21 214 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SERPINB11Q96P15 392 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SGPP1Q9BX95 441 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 C6orf106Q9H6K1 298 aaPredicted RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 POPDC2Q9HBU9 364 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NLRC4Q9NPP4 1024 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 PRSS16Q9NQE7 514 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 FANCLQ9NW38 375 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 DDIT4Q9NX09 232 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
CDHR3-213ENST00000488386 STOML2Q9UJZ1 356 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 PILRBQ9UKJ0 227 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 NFE2L3Q9Y4A8 694 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 SPTBN2O15020 2390 aa6.09□□□□□ -1.43
CDHR3-213ENST00000488386 PLXNA2O75051 1894 aa6.09□□□□□ -1.44
CDHR3-213ENST00000488386 TMEM131Q92545 1883 aa6.09□□□□□ -1.44
CDHR3-213ENST00000488386 TP53BP1Q12888 1972 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-213ENST00000488386 TRBV23-1A0A0A0MS06 115 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 SPAARA0A1B0GVQ0 90 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 FAM47DPA6NHR8 397 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 MEI4A8MW99 385 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 TTC34A8MYJ7 566 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 H0Y626 953 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 I6L893 689 aaPredicted RBP6.08□□□□□ -1.44
CDHR3-213ENST00000488386 M0QYT0 321 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 KCNK3O14649 394 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 CNTN5O94779 1100 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 GFPT2O94808 682 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 LUC7L3O95232 432 aaKnown RBP6.08□□□□□ -1.44
CDHR3-213ENST00000488386 IGLV3-25P01717 112 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 APOEP02649 317 aa6.08□□□□□ -1.44
CDHR3-213ENST00000488386 MPOP05164 745 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms