RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IRF1P10914 325 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 EDN2P20800 178 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 DCTDP32321 178 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 MAN1A1P33908 653 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 CCR9P51686 369 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 POLGP54098 1239 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 PMS2P54278 862 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 PTP4A2Q12974 167 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 TRAF1Q13077 416 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ITGADQ13349 1161 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ARHGEF6Q15052 776 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 HSPB2Q16082 182 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FSCBQ5H9T9 825 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 DNTTIP2Q5QJE6 756 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 PRAMEF19Q5SWL8 479 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FNBP1LQ5T0N5 605 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 AWAT2Q6E213 333 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FAM180BQ6P0A1 224 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ZNF549Q6P9A3 640 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 INO80CQ6PI98 192 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 CPLX2Q6PUV4 134 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 KRBA2Q6ZNG9 492 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 C4orf50Q6ZRC1 276 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 Q6ZSV7 163 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ZNF367Q7RTV3 350 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 PATL1Q86TB9 770 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FAM9BQ8IZU0 186 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 CNTROBQ8N137 903 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 TEX45Q8NA69 505 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 GJC3Q8NFK1 279 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ASB5Q8WWX0 329 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 SIN3AQ96ST3 1273 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 HIF1ANQ9NWT6 349 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 ANKRD10Q9NXR5 420 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 TAS2R10Q9NYW0 307 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 NDRG3Q9UGV2 375 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FZD10Q9ULW2 581 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 NAALADL1Q9UQQ1 740 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 FAM96BQ9Y3D0 163 aa4.03□□□□□ -1.76
ECHDC1-217ENST00000488087 OR6C75A6NL08 312 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 KLRF2D3W0D1 207 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 VWA5AO00534 786 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 TNFSF14O43557 240 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 MTA2O94776 668 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 RGS11O94810 467 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 TOMM40O96008 361 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 UBL4AP11441 157 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 SRD5A1P18405 259 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 CHMP24386 653 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 EPHA8P29322 1005 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 RYKP34925 604 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 THPOP40225 353 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 RFX2P48378 723 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 EFNA5P52803 228 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 EIF5P55010 431 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 NAP1L1P55209 391 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 CLDN2P57739 230 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 ROR2Q01974 943 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 FAM27E3Q08E93 113 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 HIST2H2ACQ16777 129 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 ZNF284Q2VY69 593 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 DCAF6Q58WW2 860 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 LRRC8EQ6NSJ5 796 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 C1orf122Q6ZSJ8 110 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 SLC46A3Q7Z3Q1 461 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 MTERF4Q7Z6M4 381 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 TDRPQ86YL5 185 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 MB21D2Q8IYB1 491 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 PARP16Q8N5Y8 322 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 CADM4Q8NFZ8 388 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 TMEM163Q8TC26 289 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 METTL6Q8TCB7 284 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 GPT2Q8TD30 523 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 ADAMTS15Q8TE58 950 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 UCMAQ8WVF2 138 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 FRAT1Q92837 279 aaPredicted RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 ZBTB9Q96C00 473 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 H2AFJQ9BTM1 129 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 USP44Q9H0E7 712 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 PNNQ9H307 717 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 MRPL44Q9H9J2 332 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 PCDHB16Q9NRJ7 776 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 PTGDR2Q9Y5Y4 395 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 VPS8Q8N3P4 1428 aa4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 RRBP1Q9P2E9 1410 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-217ENST00000488087 ZBED9Q6R2W3 1325 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 CACNA1IQ9P0X4 2223 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 GOLGA3Q08378 1498 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 A0A1B0GVT2 93 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 FAM90A10PA6NDY2 464 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 SNAP23O00161 211 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 BCAT2O15382 392 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 ASAP2O43150 1006 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 RGS14O43566 566 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 SPRY3O43610 288 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 OAZ2O95190 189 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 LCATP04180 440 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 HEXAP06865 529 aa4.01□□□□□ -1.77
ECHDC1-217ENST00000488087 HSPA1AP0DMV8 641 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms