RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 FAM71BQ8TC56 605 aa23.94■■□□□ 1.42
RNF38-208ENST00000488058 HCAR2Q8TDS4 363 aa23.94■■□□□ 1.42
RNF38-208ENST00000488058 PSKH2Q96QS6 385 aa23.94■■□□□ 1.42
RNF38-208ENST00000488058 KLF6Q99612 283 aaPredicted RBP23.94■■□□□ 1.42
RNF38-208ENST00000488058 PCDH12Q9NPG4 1184 aa23.94■■□□□ 1.42
RNF38-208ENST00000488058 TSPAN11A1L157 253 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 MFSD11O43934 449 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 MAFKO60675 156 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 LDOC1O95751 146 aaPredicted RBP23.93■■□□□ 1.42
RNF38-208ENST00000488058 SUOXP51687 545 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 PDK2Q15119 407 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 ZNF542PQ5EBM4 170 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 KDM7AQ6ZMT4 941 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 RAB44Q7Z6P3 723 aaPredicted RBP23.93■■□□□ 1.42
RNF38-208ENST00000488058 ZSWIM9Q86XI8 627 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 MAP7D3Q8IWC1 876 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 RHOT2Q8IXI1 618 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 TC2NQ8N9U0 490 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 ASB12Q8WXK4 309 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 ADAMTS14Q8WXS8 1223 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 CNDP2Q96KP4 475 aaKnown RBP23.93■■□□□ 1.42
RNF38-208ENST00000488058 LENG8Q96PV6 779 aaPredicted RBP23.93■■□□□ 1.42
RNF38-208ENST00000488058 COQ6Q9Y2Z9 468 aa23.93■■□□□ 1.42
RNF38-208ENST00000488058 TDRD6O60522 2096 aaKnown RBP23.93■■□□□ 1.42
RNF38-208ENST00000488058 MAP3K6O95382 1288 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 RABIFP47224 123 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 AP1S1P61966 158 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 NSUN2Q08J23 767 aaKnown RBP eCLIP23.92■■□□□ 1.42
RNF38-208ENST00000488058 PDE1CQ14123 709 aaPredicted RBP23.92■■□□□ 1.42
RNF38-208ENST00000488058 TMEM52BQ4KMG9 183 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 ANKRD20A8PQ5CZ79 823 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 NCBP2-AS2Q69YL0 99 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 DENND6BQ8NEG7 585 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 PCDH19Q8TAB3 1148 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 RFFLQ8WZ73 363 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 ZNF670Q9BS34 389 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 C1QTNF7Q9BXJ2 289 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 CAAP1Q9H8G2 361 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 SCUBE2Q9NQ36 999 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 DNAJC28Q9NX36 388 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 TOR4AQ9NXH8 423 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 ATP8A1Q9Y2Q0 1164 aa23.92■■□□□ 1.42
RNF38-208ENST00000488058 LRRK1Q38SD2 2015 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 ENC1O14682 589 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 PEX11BO96011 259 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 IGFALSP35858 605 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 HSPA9P38646 679 aaKnown RBP23.91■■□□□ 1.42
RNF38-208ENST00000488058 MAXP61244 160 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 MARC1Q5VT66 337 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 DCP2Q8IU60 420 aaKnown RBP23.91■■□□□ 1.42
RNF38-208ENST00000488058 PGBD5Q8N414 524 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 NEUROG3Q9Y4Z2 214 aa23.91■■□□□ 1.42
RNF38-208ENST00000488058 COL5A1P20908 1838 aaPredicted RBP23.91■■□□□ 1.42
RNF38-208ENST00000488058 RIOK3O14730 519 aaKnown RBP23.9■■□□□ 1.42
RNF38-208ENST00000488058 TNNT1P13805 278 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 MMP13P45452 471 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 ZNF75DP51815 510 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 PAFAH1B3Q15102 231 aaKnown RBP23.9■■□□□ 1.42
RNF38-208ENST00000488058 KANSL1Q7Z3B3 1105 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 PDCD6IPQ8WUM4 868 aaKnown RBP23.9■■□□□ 1.42
RNF38-208ENST00000488058 RAPGEF5Q92565 580 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 ANP32EQ9BTT0 268 aa23.9■■□□□ 1.42
RNF38-208ENST00000488058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.89■■□□□ 1.41
RNF38-208ENST00000488058 LRRD1A4D1F6 860 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 C1QTNF9BB2RNN3 333 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 FFAR2O15552 330 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 LZTS3O60299 673 aaPredicted RBP23.89■■□□□ 1.41
RNF38-208ENST00000488058 C1QTNF9P0C862 333 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 C6P13671 934 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 KDELR1P24390 212 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 MMP12P39900 470 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 ARHGAP25P42331 645 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 MAGEA1P43355 309 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 THOP1P52888 689 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 DNAJC3Q13217 504 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 FZD2Q14332 565 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 TP53I13Q8NBR0 393 aaPredicted RBP23.89■■□□□ 1.41
RNF38-208ENST00000488058 CENPTQ96BT3 561 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 ECHDC3Q96DC8 303 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 NSMCE3Q96MG7 304 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 NUDCD1Q96RS6 583 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 NT5MQ9NPB1 228 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 MBNL1Q9NR56 388 aaKnown RBP23.89■■□□□ 1.41
RNF38-208ENST00000488058 UCKL1Q9NWZ5 548 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 INTUQ9ULD6 942 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 PCDHGC4Q9Y5F7 938 aa23.89■■□□□ 1.41
RNF38-208ENST00000488058 SPTY2D1-AS1A0A0U1RR47 76 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 A8MX80 341 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 PIAS2O75928 621 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 MTA2O94776 668 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 DGKAP23743 735 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 GARSP41250 739 aaKnown RBP23.88■■□□□ 1.41
RNF38-208ENST00000488058 LIG3P49916 1009 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 PFN3P60673 137 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 POLR2LP62875 67 aaKnown RBP23.88■■□□□ 1.41
RNF38-208ENST00000488058 ITKQ08881 620 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 GALNT2Q10471 571 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 IRF4Q15306 451 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 HS1BP3Q53T59 392 aa23.88■■□□□ 1.41
RNF38-208ENST00000488058 ODF2Q5BJF6 829 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 1532.2 ms