RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 RAPGEF5Q92565 580 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 TUBGCP5Q96RT8 1024 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 ERVMER34-1Q9H9K5 563 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 PCDH12Q9NPG4 1184 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 SEPT3Q9UH03 358 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 COQ6Q9Y2Z9 468 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 HYOU1Q9Y4L1 999 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 LRP4O75096 1905 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
RPSA-208ENST00000487876 A6NNZ2 444 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 KRT7P08729 469 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 ATXN1LP0C7T5 689 aaKnown RBP13.02□□□□□ -0.33
RPSA-208ENST00000487876 SERPINA4P29622 427 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 SERPINB6P35237 376 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 CSNK1DP48730 415 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 MAXP61244 160 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 OVGP1Q12889 678 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 SGCGQ13326 291 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 UGP2Q16851 508 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 KYAT3Q6YP21 454 aaKnown RBP13.02□□□□□ -0.33
RPSA-208ENST00000487876 Q6ZSR6 202 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 KANSL1Q7Z3B3 1105 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 GLRX5Q86SX6 157 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 CHCHD4Q8N4Q1 142 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 FAF2Q96CS3 445 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
RPSA-208ENST00000487876 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 ZNF670Q9BS34 389 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 SCNM1Q9BWG6 230 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 ATP13A3Q9H7F0 1226 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 GPR27Q9NS67 375 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 KLK13Q9UKR3 277 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 FREM2Q5SZK8 3169 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 ZZEF1O43149 2961 aa13.02□□□□□ -0.33
RPSA-208ENST00000487876 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 LRRD1A4D1F6 860 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 MAGEC1O60732 1142 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 ITGAVP06756 1048 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 CR2P20023 1033 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 XPAP23025 273 aaPredicted RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 IGFALSP35858 605 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 MMP12P39900 470 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 RXRGP48443 463 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 GBE1Q04446 702 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 NSUN2Q08J23 767 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPSA-208ENST00000487876 GALNT2Q10471 571 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 GRM3Q14832 879 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 PAFAH1B3Q15102 231 aaKnown RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 PDK2Q15119 407 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 TMEM52BQ4KMG9 183 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 BRAT1Q6PJG6 821 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 OXR1Q8N573 874 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 EID2Q8N6I1 236 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 CENPTQ96BT3 561 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 LENG8Q96PV6 779 aaPredicted RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 CDC6Q99741 560 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 NOD2Q9HC29 1040 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 MBNL1Q9NR56 388 aaKnown RBP13.01□□□□□ -0.33
RPSA-208ENST00000487876 UCKL1Q9NWZ5 548 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 FTSJ1Q9UET6 329 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 LCMT1Q9UIC8 334 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 ATP8A1Q9Y2Q0 1164 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 HS3ST3A1Q9Y663 406 aa13.01□□□□□ -0.33
RPSA-208ENST00000487876 SOWAHDA6NJG2 315 aa13□□□□□ -0.33
RPSA-208ENST00000487876 C3orf70A6NLC5 250 aaPredicted RBP13□□□□□ -0.33
RPSA-208ENST00000487876 TRAFD1O14545 582 aaPredicted RBP13□□□□□ -0.33
RPSA-208ENST00000487876 FPGTO14772 594 aa13□□□□□ -0.33
RPSA-208ENST00000487876 YKT6O15498 198 aa13□□□□□ -0.33
RPSA-208ENST00000487876 TM7SF2O76062 418 aa13□□□□□ -0.33
RPSA-208ENST00000487876 C6P13671 934 aa13□□□□□ -0.33
RPSA-208ENST00000487876 TNNT1P13805 278 aa13□□□□□ -0.33
RPSA-208ENST00000487876 KDELR1P24390 212 aa13□□□□□ -0.33
RPSA-208ENST00000487876 GARSP41250 739 aaKnown RBP13□□□□□ -0.33
RPSA-208ENST00000487876 ARHGAP25P42331 645 aa13□□□□□ -0.33
RPSA-208ENST00000487876 MAGEA1P43355 309 aa13□□□□□ -0.33
RPSA-208ENST00000487876 MMP13P45452 471 aa13□□□□□ -0.33
RPSA-208ENST00000487876 LIG3P49916 1009 aa13□□□□□ -0.33
RPSA-208ENST00000487876 RENBPP51606 427 aa13□□□□□ -0.33
RPSA-208ENST00000487876 AP1S1P61966 158 aa13□□□□□ -0.33
RPSA-208ENST00000487876 BCL2L1Q07817 233 aa13□□□□□ -0.33
RPSA-208ENST00000487876 ELP6Q0PNE2 266 aa13□□□□□ -0.33
RPSA-208ENST00000487876 SLC10A2Q12908 348 aaPredicted RBP13□□□□□ -0.33
RPSA-208ENST00000487876 RALGDSQ12967 914 aa13□□□□□ -0.33
RPSA-208ENST00000487876 FZD2Q14332 565 aa13□□□□□ -0.33
RPSA-208ENST00000487876 INAVAQ3KP66 663 aa13□□□□□ -0.33
RPSA-208ENST00000487876 CCDC157Q569K6 752 aa13□□□□□ -0.33
RPSA-208ENST00000487876 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
RPSA-208ENST00000487876 RAB44Q7Z6P3 723 aaPredicted RBP13□□□□□ -0.33
RPSA-208ENST00000487876 ZSCAN30Q86W11 494 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms