RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CRTC1Q6UUV9 634 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 DNAAF5Q86Y56 855 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 SPACA3Q8IXA5 215 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 SLC35F3Q8IY50 421 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 LSMEM2Q8N112 164 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 NAF1Q96HR8 494 aaKnown RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 HIC2Q96JB3 615 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 TBATAQ96M53 351 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 UBL7Q96S82 380 aaPredicted RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 BOCQ9BWV1 1114 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 C1QTNF7Q9BXJ2 289 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 SLC13A1Q9BZW2 595 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 SLC39A8Q9C0K1 460 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 POLR1BQ9H9Y6 1135 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 PCDH12Q9NPG4 1184 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 NCKIPSDQ9NZQ3 722 aa12.32□□□□□ -0.44
VPS16-208ENST00000487461 APOBEC3BQ9UH17 382 aaKnown RBP12.32□□□□□ -0.44
VPS16-208ENST00000487461 TSPAN11A1L157 253 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 LMO7DNF2Z398 122 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 EEF2KO00418 725 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 TOR1BO14657 336 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 MUSKO15146 869 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 DXOO77932 396 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 PRKCGP05129 697 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 ANXA6P08133 673 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 TSHRP16473 764 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 XPAP23025 273 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 PSMA2P25787 234 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 HTR7P34969 479 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 RGRP47804 291 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 SUOXP51687 545 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 NDST2P52849 883 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 TPI1P60174 286 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 PPARDQ03181 441 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 ELP6Q0PNE2 266 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 LRRC14Q15048 493 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 PLEKHA7Q6IQ23 1121 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 MACC1Q6ZN28 852 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 CAMK1DQ8IU85 385 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 ZNF641Q96N77 438 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 FCRL3Q96P31 734 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 DHX35Q9H5Z1 703 aaKnown RBP12.31□□□□□ -0.44
VPS16-208ENST00000487461 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
VPS16-208ENST00000487461 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 RP1P56715 2156 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 TMEM191CA6NGB0 347 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
VPS16-208ENST00000487461 PRB1P04280 392 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 C6P13671 934 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
VPS16-208ENST00000487461 CSNK1DP48730 415 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 RPIAP49247 311 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 LIG3P49916 1009 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 PEX5P50542 639 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 INPP5AQ14642 412 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 GRM3Q14832 879 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ERMARDQ5T6L9 678 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ARHGAP36Q6ZRI8 547 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 GPR155Q7Z3F1 870 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 SRLQ86TD4 932 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 HID1Q8IV36 788 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ARHGAP12Q8IWW6 846 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 TSEN2Q8NCE0 465 aaKnown RBP12.3□□□□□ -0.44
VPS16-208ENST00000487461 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 GLMNQ92990 594 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ATXN7L3BQ96GX2 97 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 PRR11Q96HE9 360 aaPredicted RBP12.3□□□□□ -0.44
VPS16-208ENST00000487461 NSMCE3Q96MG7 304 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 LGMNQ99538 433 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 APOOQ9BUR5 198 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 TRIM7Q9C029 511 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
VPS16-208ENST00000487461 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
VPS16-208ENST00000487461 DONSONQ9NYP3 566 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms