RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NAP1L3Q99457 506 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 FERMT1Q9BQL6 677 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 SLC6A17Q9H1V8 727 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 ZDHHC6Q9H6R6 413 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 PRDM16Q9HAZ2 1276 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 PDFQ9HBH1 243 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 UBP1Q9NZI7 540 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 BCCIPQ9P287 314 aaKnown RBP eCLIP5.71□□□□□ -1.5
COPS3-208ENST00000486032 SEPT3Q9UH03 358 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 SUN2Q9UH99 717 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 RSPH14Q9UHP6 348 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 EVLQ9UI08 416 aaPredicted RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 STARD13Q9Y3M8 1113 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 MYO18AQ92614 2054 aaKnown RBP5.71□□□□□ -1.5
COPS3-208ENST00000486032 ZDBF2Q9HCK1 2354 aa5.71□□□□□ -1.5
COPS3-208ENST00000486032 F5P12259 2224 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 EDDM13A0A1B0GTR0 161 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TCRBV21S2A2A0A5A6 115 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PRR33A8MZF0 331 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 RNF103O00237 685 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PDE2AO00408 941 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 CES2O00748 559 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MUSKO15146 869 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 ATP9BO43861 1147 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 RNASEH1O60930 286 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 ATG13O75143 517 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PHF2O75151 1096 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 STK10O94804 968 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 PIGNO95427 931 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 IL1BP01584 269 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TUBB4AP04350 444 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 ZSCAN5DPP0CG00 497 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 HNRNPLP14866 589 aaKnown RBP eCLIP5.7□□□□□ -1.5
COPS3-208ENST00000486032 ETS1P14921 441 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PRLRP16471 622 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 AOC1P19801 751 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PTPN3P26045 913 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 ACTN2P35609 894 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 RGRP47804 291 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PSMD8P48556 350 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 RENBPP51606 427 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 CCNHP51946 323 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 DGKEP52429 567 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 GDF10P55107 478 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 SNRPD1P62314 119 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 RAC1P63000 192 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 SATB1Q01826 763 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 DSC2Q02487 901 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 RAD51Q06609 339 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 CKAP4Q07065 602 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 SLC20A2Q08357 652 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 DMWDQ09019 674 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TCF15Q12870 199 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MTAPQ13126 283 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 XRCC4Q13426 336 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 BYSLQ13895 437 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 PRKD1Q15139 912 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 E2F5Q15329 346 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PCSK7Q16549 785 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 CCNG2Q16589 344 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 INO80DQ53TQ3 878 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 SYCP2LQ5T4T6 812 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 CFAP58Q5T655 872 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 ANO7Q6IWH7 933 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 CCDC137Q6PK04 289 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 TSSK4Q6SA08 328 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PRR23CQ6ZRP0 262 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 LRRC49Q8IUZ0 686 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MMAAQ8IVH4 418 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 PARP9Q8IXQ6 854 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MAML2Q8IZL2 1156 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 ZNF567Q8N184 647 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PGBD5Q8N414 524 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 FBXL6Q8N531 539 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PCDH20Q8N6Y1 951 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 CCDC89Q8N998 374 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TSTD1Q8NFU3 115 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 HMGB4Q8WW32 186 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 OR8D1Q8WZ84 308 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PTPRN2Q92932 1015 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 GDAP1L1Q96MZ0 367 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 OLFM3Q96PB7 478 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TSGA13Q96PP4 275 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 KRT12Q99456 494 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 SEMA3CQ99985 751 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 TPSD1Q9BZJ3 242 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 DDX47Q9H0S4 455 aaKnown RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 TMEM245Q9H330 911 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 PRSS16Q9NQE7 514 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 DLGAP2Q9P1A6 1054 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 HECAQ9UBI9 543 aaPredicted RBP5.7□□□□□ -1.5
COPS3-208ENST00000486032 LHX3Q9UBR4 397 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MMP17Q9ULZ9 603 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 HS3ST2Q9Y278 367 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
COPS3-208ENST00000486032 A0A1W2PP55 124 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 BCLAF3A2AJT9 711 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 TARSL2A2RTX5 802 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms