RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ERAP2Q6P179 960 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
COL6A1-204ENST00000486023 ZNF641Q96N77 438 aaPredicted RBP17.82■□□□□ 0.44
COL6A1-204ENST00000486023 UVRAGQ9P2Y5 699 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 NENFQ9UMX5 172 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 AKAP13Q12802 2813 aa17.82■□□□□ 0.44
COL6A1-204ENST00000486023 SSU72P8A0A1W2PR75 194 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 PROS1P07225 676 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 DGKAP23743 735 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 IL4RP24394 825 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 RABIFP47224 123 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 LIG3P49916 1009 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 RENBPP51606 427 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 THOP1P52888 689 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 CLDN6P56747 220 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 MAXP61244 160 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 ELP6Q0PNE2 266 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 ASTE1Q2TB18 679 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-204ENST00000486023 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 ZSWIM9Q86XI8 627 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 SLC25A45Q8N413 288 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 SLC35G2Q8TBE7 412 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 LRRN4Q8WUT4 740 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 LENG8Q96PV6 779 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-204ENST00000486023 TUBGCP5Q96RT8 1024 aa17.81■□□□□ 0.44
COL6A1-204ENST00000486023 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
COL6A1-204ENST00000486023 MBNL1Q9NR56 388 aaKnown RBP17.81■□□□□ 0.44
COL6A1-204ENST00000486023 SPEGQ15772 3267 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 DOCK9Q9BZ29 2069 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 TRIM38O00635 465 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 SIGLEC6O43699 453 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 NEBLO76041 1014 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 MYF5P13349 255 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 SERPINB6P35237 376 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 DPYSL3Q14195 570 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 FZD2Q14332 565 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 TMEM52BQ4KMG9 183 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 TPRG1LQ5T0D9 272 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 KYAT3Q6YP21 454 aaKnown RBP17.8■□□□□ 0.44
COL6A1-204ENST00000486023 DCP2Q8IU60 420 aaKnown RBP17.8■□□□□ 0.44
COL6A1-204ENST00000486023 CNGA4Q8IV77 575 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 BBS5Q8N3I7 341 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 FAM174AQ8TBP5 190 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 GATA6Q92908 595 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 CENPTQ96BT3 561 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 SCUBE2Q9NQ36 999 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
COL6A1-204ENST00000486023 RIOK3O14730 519 aaKnown RBP17.79■□□□□ 0.44
COL6A1-204ENST00000486023 MAFKO60675 156 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 PIAS2O75928 621 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 C6P13671 934 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 CSNK1DP48730 415 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 DAB2P98082 770 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 NSUN2Q08J23 767 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL6A1-204ENST00000486023 LRRC14Q15048 493 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 TCEA2Q15560 299 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 ANKRD20A8PQ5CZ79 823 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 MARC1Q5VT66 337 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 BRAT1Q6PJG6 821 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 KANSL1Q7Z3B3 1105 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 ZSCAN30Q86W11 494 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 MAP7D3Q8IWC1 876 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 HCAR2Q8TDS4 363 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 LMX1AQ8TE12 382 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 TSC1Q92574 1164 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 NSMCE3Q96MG7 304 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 PSKH2Q96QS6 385 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 ATP8A1Q9Y2Q0 1164 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 TTLL3Q9Y4R7 772 aa17.79■□□□□ 0.44
COL6A1-204ENST00000486023 SPTY2D1-AS1A0A0U1RR47 76 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 RFPL3O75679 317 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 KRT37O76014 449 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 PCCBP05166 539 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 KRT7P08729 469 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 JUNDP17535 347 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 IGFALSP35858 605 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 MMP13P45452 471 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 SUOXP51687 545 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 HNRNPKP61978 463 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL6A1-204ENST00000486023 POLR2LP62875 67 aaKnown RBP17.78■□□□□ 0.44
COL6A1-204ENST00000486023 IRF4Q15306 451 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 PARGQ86W56 976 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 PGBD5Q8N414 524 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 DENND6BQ8NEG7 585 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 PCDH19Q8TAB3 1148 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 ASB12Q8WXK4 309 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 NOD2Q9HC29 1040 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 RCOR3Q9P2K3 495 aaPredicted RBP17.78■□□□□ 0.44
COL6A1-204ENST00000486023 KLF15Q9UIH9 416 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 ZMIZ1Q9ULJ6 1067 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 CHD5Q8TDI0 1954 aa17.78■□□□□ 0.44
COL6A1-204ENST00000486023 MAP1BP46821 2468 aaKnown RBP17.78■□□□□ 0.44
COL6A1-204ENST00000486023 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.77■□□□□ 0.44
COL6A1-204ENST00000486023 TSPAN11A1L157 253 aa17.77■□□□□ 0.44
COL6A1-204ENST00000486023 H3BM21 787 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms