RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 VCPIP1Q96JH7 1222 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 CPEB1Q9BZB8 566 aaKnown RBP19.44■□□□□ 0.7
COL27A1-205ENST00000485397 CATSPERBQ9H7T0 1116 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 COL27A1Q8IZC6 1860 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-205ENST00000485397 ANKRD62A6NC57 917 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 RPIAP49247 311 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 OGDHQ02218 1023 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 PPARDQ03181 441 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 TCEA2Q15560 299 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 WSCD2Q2TBF2 565 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 PCSK4Q6UW60 755 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 RBM44Q6ZP01 1051 aaKnown RBP19.43■□□□□ 0.7
COL27A1-205ENST00000485397 NYAP1Q6ZVC0 841 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 TPCN2Q8NHX9 752 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 KCNE4Q8WWG9 221 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 GLMNQ92990 594 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 TBATAQ96M53 351 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 NCAPGQ9BPX3 1015 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 CNPY3Q9BT09 278 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 SUV39H2Q9H5I1 410 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 CPNE5Q9HCH3 593 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 GPATCH2LQ9NWQ4 482 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 UBA2Q9UBT2 640 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-205ENST00000485397 RP1P56715 2156 aa19.43■□□□□ 0.7
COL27A1-205ENST00000485397 PMS2P1A4D2B8 440 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 J3KR12 359 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 TOR1BO14657 336 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 RIOK3O14730 519 aaKnown RBP19.42■□□□□ 0.7
COL27A1-205ENST00000485397 PRKCGP05129 697 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 LRRC14Q15048 493 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 ACAD10Q6JQN1 1059 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 DCUN1D2Q6PH85 259 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 CLEC17AQ6ZS10 378 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 MCOLN2Q8IZK6 566 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 LSM14AQ8ND56 463 aaKnown RBP19.42■□□□□ 0.7
COL27A1-205ENST00000485397 ANKRD20A12PQ8NF67 263 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 TSACCQ96A04 125 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-205ENST00000485397 PRR11Q96HE9 360 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-205ENST00000485397 CELF6Q96J87 481 aaKnown RBP19.42■□□□□ 0.7
COL27A1-205ENST00000485397 CCDC3Q9BQI4 270 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 LRRC19Q9H756 370 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 PDFQ9HBH1 243 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 PCDH12Q9NPG4 1184 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 THSD1Q9NS62 852 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 GULP1Q9UBP9 304 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 PADI4Q9UM07 663 aa19.42■□□□□ 0.7
COL27A1-205ENST00000485397 TSPAN11A1L157 253 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 KLK10O43240 276 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 BUB1BO60566 1050 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-205ENST00000485397 C6P13671 934 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 RBMS1P29558 406 aaKnown RBP19.41■□□□□ 0.7
COL27A1-205ENST00000485397 AIF1P55008 147 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 TPI1P60174 286 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 MYL5Q02045 173 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ELP6Q0PNE2 266 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 UGP2Q16851 508 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ALG11Q2TAA5 492 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ARHGAP40Q5TG30 622 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 BROXQ5VW32 411 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ESRP1Q6NXG1 681 aaKnown RBP19.41■□□□□ 0.7
COL27A1-205ENST00000485397 FOXR1Q6PIV2 292 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ENPP7Q6UWV6 458 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 RD3Q7Z3Z2 195 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ZSWIM9Q86XI8 627 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 DNAAF5Q86Y56 855 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 HID1Q8IV36 788 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 HCAR2Q8TDS4 363 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 NAT6Q93015 286 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 SLC46A1Q96NT5 459 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 ERGIC2Q96RQ1 377 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 SYNDIG1Q9H7V2 258 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 TAS2R14Q9NYV8 317 aa19.41■□□□□ 0.7
COL27A1-205ENST00000485397 BPTFQ12830 3046 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 LRRC10BA6NIK2 292 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 FGF10O15520 208 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-205ENST00000485397 TCEA3O75764 348 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 CDK11BP21127 795 aaKnown RBP19.4■□□□□ 0.7
COL27A1-205ENST00000485397 RGRP47804 291 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 PEX5P50542 639 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 SUOXP51687 545 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 HK3P52790 923 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 TMPRSS3P57727 454 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 CA9Q16790 459 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 IGF2-ASQ6U949 168 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 APTXQ7Z2E3 356 aaKnown RBP19.4■□□□□ 0.7
COL27A1-205ENST00000485397 CAMK1DQ8IU85 385 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 FSTL5Q8N475 847 aaPredicted RBP19.4■□□□□ 0.7
COL27A1-205ENST00000485397 GRAMD1AQ96CP6 724 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 APOOQ9BUR5 198 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 EDEM3Q9BZQ6 932 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 SLC39A8Q9C0K1 460 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 ANO10Q9NW15 660 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 SIRPGQ9P1W8 387 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 DOLKQ9UPQ8 538 aa19.4■□□□□ 0.7
COL27A1-205ENST00000485397 TMCO5BA8MYB1 307 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PRAMEF11O60813 436 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 ZIC2O95409 532 aaPredicted RBP19.39■□□□□ 0.69
COL27A1-205ENST00000485397 PCCBP05166 539 aa19.39■□□□□ 0.69
COL27A1-205ENST00000485397 CTSEP14091 401 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms