RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TM4SF5O14894 197 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 MAGEC1O60732 1142 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 MMP20O60882 483 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 PAK4O96013 591 aaPredicted RBP19.31■□□□□ 0.68
SNX17-206ENST00000484886 ITIH2P19823 946 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 CCNCP24863 283 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 SUOXP51687 545 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 KIF5AQ12840 1032 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 SLC10A2Q12908 348 aaPredicted RBP19.31■□□□□ 0.68
SNX17-206ENST00000484886 LLGL1Q15334 1064 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 UGP2Q16851 508 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 KAZNQ674X7 775 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 PSAPL1Q6NUJ1 521 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 ZSCAN30Q86W11 494 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 DEFB124Q8NES8 71 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 KLHDC7BQ96G42 594 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 NUDCD1Q96RS6 583 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 MGME1Q9BQP7 344 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 PCDH12Q9NPG4 1184 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 TM7SF3Q9NS93 570 aa19.31■□□□□ 0.68
SNX17-206ENST00000484886 ASCC3Q8N3C0 2202 aaKnown RBP19.31■□□□□ 0.68
SNX17-206ENST00000484886 BTNL10A8MVZ5 291 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 H0Y8X5 98 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 AREL1O15033 823 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 MATN3O15232 486 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 SPINT1O43278 529 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 ZRANB2O95218 330 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNX17-206ENST00000484886 KCNK5O95279 499 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 PRKCGP05129 697 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 CCNB1P14635 433 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 MARCKSL1P49006 195 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 CCT8P50990 548 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 CLDN2P57739 230 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 FAM193AP78312 1265 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 IL9RQ01113 521 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 AP1B1Q10567 949 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 SLC14A1Q13336 389 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 HNRNPDQ14103 355 aaKnown RBP19.3■□□□□ 0.68
SNX17-206ENST00000484886 TFDP2Q14188 446 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 PRAMEF14Q5SWL7 426 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 SLC9A4Q6AI14 798 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 NPNTQ6UXI9 565 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 SPOCD1Q6ZMY3 1216 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 PTAR1Q7Z6K3 402 aaPredicted RBP19.3■□□□□ 0.68
SNX17-206ENST00000484886 IQCHQ86VS3 1027 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 CCDC13Q8IYE1 715 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 KIAA1524Q8TCG1 905 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 SETD7Q8WTS6 366 aaKnown RBP19.3■□□□□ 0.68
SNX17-206ENST00000484886 RBM41Q96IZ5 413 aaKnown RBP19.3■□□□□ 0.68
SNX17-206ENST00000484886 TSGA13Q96PP4 275 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 LGMNQ99538 433 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 POLR1EQ9GZS1 481 aaKnown RBP19.3■□□□□ 0.68
SNX17-206ENST00000484886 NOD2Q9HC29 1040 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 RBM22Q9NW64 420 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNX17-206ENST00000484886 ATP8A1Q9Y2Q0 1164 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 PCDHGC4Q9Y5F7 938 aa19.3■□□□□ 0.68
SNX17-206ENST00000484886 PJA2O43164 708 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 THEGLP0DJG4 465 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 KRT10P13645 584 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 CD59P13987 128 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 CSRP1P21291 193 aaKnown RBP19.29■□□□□ 0.68
SNX17-206ENST00000484886 CDKN2BP42772 138 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 NXPH1P58417 271 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 POLR2LP62875 67 aaKnown RBP19.29■□□□□ 0.68
SNX17-206ENST00000484886 SEMG2Q02383 582 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 OVGP1Q12889 678 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 FGL2Q14314 439 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 PDK1Q15118 436 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 ZSWIM9Q86XI8 627 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 RCOR2Q8IZ40 523 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 TMEM145Q8NBT3 493 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 KRT35Q92764 455 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 HDAC11Q96DB2 347 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 SEMA3CQ99985 751 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 C1QTNF7Q9BXJ2 289 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 C1QTNF2Q9BXJ5 285 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 SEPT10Q9P0V9 454 aa19.29■□□□□ 0.68
SNX17-206ENST00000484886 KNL1Q8NG31 2342 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 A6NNZ2 444 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 FPGTO14772 594 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 PPP1R12AO14974 1030 aaPredicted RBP19.28■□□□□ 0.68
SNX17-206ENST00000484886 DFNA5O60443 496 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 CST8O60676 142 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 TM7SF2O76062 418 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 CPP00450 1065 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 ZNF883P0CG24 379 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 CR2P20023 1033 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 ARRB1P49407 418 aaPredicted RBP19.28■□□□□ 0.68
SNX17-206ENST00000484886 SUZ12Q15022 739 aaKnown RBP19.28■□□□□ 0.68
SNX17-206ENST00000484886 ZNF423Q2M1K9 1284 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 TMEM52BQ4KMG9 183 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 TFDP3Q5H9I0 405 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 RALGPS1Q5JS13 557 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 NAXDQ8IW45 347 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 TEX26Q8N6G2 289 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 MAML1Q92585 1016 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 ELF4Q99607 663 aaPredicted RBP19.28■□□□□ 0.68
SNX17-206ENST00000484886 TRIM10Q9UDY6 481 aa19.28■□□□□ 0.68
SNX17-206ENST00000484886 PCDHB9Q9Y5E1 797 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms