RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 PGAP2Q9UHJ9 254 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 PCDHGB5Q9Y5G0 923 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 CLDN16Q9Y5I7 305 aa4.28□□□□□ -1.72
SMC4-215ENST00000484799 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 ARHGAP10A1A4S6 786 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 CYSRT1A8MQ03 144 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 BMPR1BO00238 502 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 PCNAP12004 261 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 DCTDP32321 178 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 ACTR2P61160 394 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 YWHAZP63104 245 aaKnown RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 DHX34Q14147 1143 aaKnown RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 NEDD9Q14511 834 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 IRAK1BP1Q5VVH5 260 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 DENND1BQ6P3S1 775 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 PRSS45Q7RTY3 260 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 TRMT1LQ7Z2T5 733 aaKnown RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 AADATQ8N5Z0 425 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 RNFT2Q96EX2 444 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 MASTLQ96GX5 879 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 CD180Q99467 661 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 HERC2P3Q9BVR0 1158 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 ALKBH4Q9NXW9 302 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 SRP68Q9UHB9 627 aaKnown RBP4.27□□□□□ -1.73
SMC4-215ENST00000484799 VDAC3Q9Y277 283 aa4.27□□□□□ -1.73
SMC4-215ENST00000484799 A0A087WYN8 130 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 STX16-NPEPL1H3BU86 382 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 IPO5O00410 1097 aaKnown RBP4.26□□□□□ -1.73
SMC4-215ENST00000484799 STX16O14662 325 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TIMM23O14925 209 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 ADAP00813 363 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 KCNA5P22460 613 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 DGKAP23743 735 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 SSTR2P30874 369 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 RGS19P49795 217 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 NLRP5P59047 1200 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 PHEXP78562 749 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TROAPQ12815 778 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 PPFIA1Q13136 1202 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 ACCSLQ4AC99 568 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TUBA1AQ71U36 451 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 ZC3HC1Q86WB0 502 aaKnown RBP4.26□□□□□ -1.73
SMC4-215ENST00000484799 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 NAGSQ8N159 534 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TEX19Q8NA77 164 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 RFWD2Q8NHY2 731 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 SPATA20Q8TB22 786 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TRAPPC12Q8WVT3 735 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 CNOT9Q92600 299 aaKnown RBP4.26□□□□□ -1.73
SMC4-215ENST00000484799 ZC3HAV1LQ96H79 300 aaKnown RBP4.26□□□□□ -1.73
SMC4-215ENST00000484799 UHRF2Q96PU4 802 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 TUBA1CQ9BQE3 449 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 EVA1AQ9H8M9 152 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 SMARCAL1Q9NZC9 954 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 GRHPRQ9UBQ7 328 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 POU2F3Q9UKI9 436 aa4.26□□□□□ -1.73
SMC4-215ENST00000484799 IGHV4OR15-8A0A075B7B6 117 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 PRAC2D3DTV9 90 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 RGS11O94810 467 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 CRYAAP02489 173 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 SP1P08047 785 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 IGHV4-30-4P0DP06 118 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 CD72P21854 359 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 STX2P32856 288 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 ADD2P35612 726 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 CENPAP49450 140 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 SLC18A2Q05940 514 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 ANKRD1Q15327 319 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 RPE65Q16518 533 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 SLC18A3Q16572 532 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 FBXO43Q4G163 708 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 PMS2CLQ68D20 193 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 FAM122CQ6P4D5 195 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 LDHAL6AQ6ZMR3 332 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 DCUN1D3Q8IWE4 304 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 SFTPA2Q8IWL1 248 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 MYCT1Q8N699 235 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 CEP70Q8NHQ1 597 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 THAP4Q8WY91 577 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 GCC1Q96CN9 775 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 C3orf30Q96M34 536 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 TBATAQ96M53 351 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 TLR8Q9NR97 1041 aaKnown RBP4.25□□□□□ -1.73
SMC4-215ENST00000484799 NDRG3Q9UGV2 375 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 CD207Q9UJ71 328 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 GDAQ9Y2T3 454 aa4.25□□□□□ -1.73
SMC4-215ENST00000484799 NDUFB4O95168 129 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 PMS2P2O95744 297 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms