RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 KRT9P35527 623 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 PTK2Q05397 1052 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
UBR4-213ENST00000483922 INPP5AQ14642 412 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 TMEM52BQ4KMG9 183 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 LVRNQ6Q4G3 990 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 ENPP7Q6UWV6 458 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 ZNF574Q6ZN55 896 aaPredicted RBP13.03□□□□□ -0.32
UBR4-213ENST00000483922 RD3Q7Z3Z2 195 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 ZDHHC17Q8IUH5 632 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 SLITRK4Q8IW52 837 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 FAM71AQ8IYT1 594 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
UBR4-213ENST00000483922 EMC1Q8N766 993 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 PLA2G15Q8NCC3 412 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 PMEPA1Q969W9 287 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 C18orf8Q96DM3 657 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 APOOQ9BUR5 198 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 SEMA6CQ9H3T2 930 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 GPR34Q9UPC5 381 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 OR1A2Q9Y585 309 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 LRP4O75096 1905 aa13.03□□□□□ -0.32
UBR4-213ENST00000483922 LRRK2Q5S007 2527 aa13.02□□□□□ -0.32
UBR4-213ENST00000483922 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 CXorf51AA0A1B0GTR3 108 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 B4GAT1O43505 415 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 CCL4P13236 92 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 SCNN1AP37088 669 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 PEX5P50542 639 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 B4GALNT1Q00973 533 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 TLE1Q04724 770 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 PAK1Q13153 545 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 C16orf72Q14CZ0 275 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 ELOCQ15369 112 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.33
UBR4-213ENST00000483922 GBP6Q6ZN66 633 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 ZSWIM9Q86XI8 627 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 CCL4L1Q8NHW4 92 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.33
UBR4-213ENST00000483922 ARHGAP9Q9BRR9 750 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 SLC12A9Q9BXP2 914 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 SYNCQ9H7C4 482 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 MRPL40Q9NQ50 206 aaKnown RBP13.02□□□□□ -0.33
UBR4-213ENST00000483922 TMEM248Q9NWD8 314 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 APPL1Q9UKG1 709 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 RNF215Q9Y6U7 377 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 DOPEY2Q9Y3R5 2298 aa13.02□□□□□ -0.33
UBR4-213ENST00000483922 TMEM202A6NGA9 273 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 KDELR3O43731 214 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 BUB1BO60566 1050 aaPredicted RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 GM2AP17900 193 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 ADRA1BP35368 520 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 PPP1R2P41236 205 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 SRP54P61011 504 aaKnown RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 NRG1Q02297 640 aaPredicted RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 CYTH1Q15438 398 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 IGFBP7Q16270 282 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 EXOC3L4Q17RC7 722 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 C15orf59Q2T9L4 293 aaPredicted RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 CCDC14Q49A88 953 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 MANEAQ5SRI9 462 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 PTRH1Q86Y79 214 aaKnown RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 PELI3Q8N2H9 469 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 JPH3Q8WXH2 748 aaPredicted RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 OR1E3Q8WZA6 343 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 PDXPQ96GD0 296 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 TTYH3Q9C0H2 523 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 STRADBQ9C0K7 418 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 GEMIN8Q9NWZ8 242 aaKnown RBP13.01□□□□□ -0.33
UBR4-213ENST00000483922 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 MFHAS1Q9Y4C4 1052 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
UBR4-213ENST00000483922 UNC13CQ8NB66 2214 aa13□□□□□ -0.33
UBR4-213ENST00000483922 GTPBP10A4D1E9 387 aaKnown RBP13□□□□□ -0.33
UBR4-213ENST00000483922 CLEC18AA5D8T8 446 aa13□□□□□ -0.33
UBR4-213ENST00000483922 TMX2-CTNND1H3BSU7 103 aa13□□□□□ -0.33
UBR4-213ENST00000483922 TOR1BO14657 336 aa13□□□□□ -0.33
UBR4-213ENST00000483922 TMCC1O94876 653 aa13□□□□□ -0.33
UBR4-213ENST00000483922 LRIG2O94898 1065 aa13□□□□□ -0.33
UBR4-213ENST00000483922 RASGRP1O95267 797 aa13□□□□□ -0.33
UBR4-213ENST00000483922 PIGNO95427 931 aa13□□□□□ -0.33
UBR4-213ENST00000483922 FUCA1P04066 466 aa13□□□□□ -0.33
UBR4-213ENST00000483922 PRKCGP05129 697 aa13□□□□□ -0.33
UBR4-213ENST00000483922 ALPIP09923 528 aa13□□□□□ -0.33
UBR4-213ENST00000483922 JMJD7P0C870 316 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CTSEP14091 401 aa13□□□□□ -0.33
UBR4-213ENST00000483922 CYP11B1P15538 503 aa13□□□□□ -0.33
UBR4-213ENST00000483922 RHOQP17081 205 aa13□□□□□ -0.33
UBR4-213ENST00000483922 BLKP51451 505 aa13□□□□□ -0.33
UBR4-213ENST00000483922 MAPK10P53779 464 aa13□□□□□ -0.33
UBR4-213ENST00000483922 ATP11AP98196 1134 aa13□□□□□ -0.33
UBR4-213ENST00000483922 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.33
UBR4-213ENST00000483922 NFATC4Q14934 902 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms