RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ZNF81P51508 661 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 DRG2P55039 364 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CACNB2Q08289 660 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 VEPH1Q14D04 833 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 DUPD1Q68J44 220 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 DAW1Q8N136 415 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 UBA3Q8TBC4 463 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PIH1D1Q9NWS0 290 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 DRG1Q9Y295 367 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 RRM1P23921 792 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 RFX3P48380 749 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CSTF1Q05048 431 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PPIL2Q13356 520 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 LSAMPQ13449 338 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 TTLL9Q3SXZ7 439 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CBWD2Q8IUF1 395 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 ASB15Q8WXK1 588 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 C12orf66Q96MD2 445 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF69Q9UC07 566 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PALLDQ8WX93 1383 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 NCAPD2Q15021 1401 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PROSCO94903 275 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 NR3C2P08235 984 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CBFBQ13951 182 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CXorf57Q6NSI4 855 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 IL27RAQ6UWB1 636 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 MFSD7Q6UXD7 560 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 COMMD7Q86VX2 200 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 IGDCC4Q8TDY8 1250 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 STARD8Q92502 1023 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 EIF4G3O43432 1585 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 K7EPI3 171 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 YWHAQP27348 245 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 S100A3P33764 101 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 FGL2Q14314 439 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 BOLA3Q53S33 107 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 AADACL4Q5VUY2 407 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 TRPM4Q8TD43 1214 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 SLC30A4O14863 429 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 ITGB1P05556 798 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CDH13P55290 713 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 TPRG1LQ5T0D9 272 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 FAM220AQ7Z4H9 259 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 LEMD2Q8NC56 503 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 GANCQ8TET4 914 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 C8orf37Q96NL8 207 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 SLC17A7Q9P2U7 560 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 ADGRE2Q9UHX3 823 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 OAS3Q9Y6K5 1087 aaKnown RBP10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CD151P48509 253 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 RGS1Q08116 209 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 CES3Q6UWW8 571 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 PGAM4Q8N0Y7 254 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 APBA2Q99767 749 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 FAIMQ9NVQ4 179 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 ZMYM5Q9UJ78 669 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 USP20Q9Y2K6 914 aa10.31□□□□□ -0.76
COL12A1-207ENST00000483888 C2orf81A6NN90 581 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 M0R233 179 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 RGS14O43566 566 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CYP3A4P08684 503 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ERVK-10P10266 1014 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 LHCGRP22888 699 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CDH15P55291 814 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 DLGAP5Q15398 846 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PLEKHG4Q58EX7 1191 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 TRABD2AQ86V40 505 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 FEM1AQ9BSK4 669 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 SPARCP09486 303 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ZNF772Q68DY9 489 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 KCTD5Q9NXV2 234 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PSME2Q9UL46 239 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PRDM15P57071 1507 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 HPCAL1P37235 193 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 STT3AP46977 705 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 OR56A4Q8NGH8 313 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PCDH19Q8TAB3 1148 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GAD1Q99259 594 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 RANBP3Q9H6Z4 567 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 TBC1D22BQ9NU19 505 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 PAEPP09466 180 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 CD36P16671 472 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 TNNI3P19429 210 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ERVK-8P63133 956 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 GALNT3Q14435 633 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 RBM48Q5RL73 367 aaKnown RBP10.3□□□□□ -0.76
COL12A1-207ENST00000483888 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 KLHL28Q9NXS3 571 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 ERBB3P21860 1342 aa10.3□□□□□ -0.76
COL12A1-207ENST00000483888 APOC3P02656 99 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms