RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 LRRC61Q9BV99 259 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 DUSP23Q9BVJ7 150 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 SUV39H2Q9H5I1 410 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 CATSPERBQ9H7T0 1116 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 PCDH12Q9NPG4 1184 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
ATG4B-221ENST00000483778 UBA2Q9UBT2 640 aaPredicted RBP18.2■□□□□ 0.5
ATG4B-221ENST00000483778 H3BM21 787 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 MUSKO15146 869 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 YY2O15391 372 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 PRAMEF11O60813 436 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 GP1BAP07359 652 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 TSHRP16473 764 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 DUSP3P51452 185 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 THOP1P52888 689 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 TPI1P60174 286 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 RAD51Q06609 339 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 FAXCQ5TGI0 409 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 PLEKHA7Q6IQ23 1121 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 LRRC69Q6ZNQ3 347 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 ZSCAN30Q86W11 494 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 ARHGAP12Q8IWW6 846 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 TSEN2Q8NCE0 465 aaKnown RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 SNRNP25Q9BV90 132 aaKnown RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 BOCQ9BWV1 1114 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 ABCG4Q9H172 646 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 DHX35Q9H5Z1 703 aaKnown RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 APOBEC3BQ9UH17 382 aaKnown RBP18.19■□□□□ 0.5
ATG4B-221ENST00000483778 SALL4Q9UJQ4 1053 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 AP4E1Q9UPM8 1137 aa18.19■□□□□ 0.5
ATG4B-221ENST00000483778 KALRNO60229 2985 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 TTC24A2A3L6 582 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-221ENST00000483778 EME2A4GXA9 379 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ANKRD62A6NC57 917 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 TMEM191CA6NGB0 347 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 TPP1O14773 563 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 PSMA2P25787 234 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ACTN2P35609 894 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
ATG4B-221ENST00000483778 GABREP78334 506 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 TLE3Q04726 772 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ACAP1Q15027 740 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 UGP2Q16851 508 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ISXQ2M1V0 245 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ANO6Q4KMQ2 910 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 CCDC183Q5T5S1 534 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 AFMIDQ63HM1 303 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 SPACA3Q8IXA5 215 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 NPWQ8N729 165 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ARHGEF26Q96DR7 871 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 HIC2Q96JB3 615 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 NAP1L5Q96NT1 182 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-221ENST00000483778 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 DEPDC7Q96QD5 511 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 IL12RB2Q99665 862 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 SPASTQ9UBP0 616 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 ATMQ13315 3056 aa18.18■□□□□ 0.5
ATG4B-221ENST00000483778 TSPAN11A1L157 253 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 LMO7DNF2Z398 122 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 EEF2KO00418 725 aaKnown RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 DDX3XO00571 662 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■□□□ 13.3
ATG4B-221ENST00000483778 RIOK3O14730 519 aaKnown RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 FGF10O15520 208 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 RRP8O43159 456 aaKnown RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 FTLP02792 175 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 SKILP12757 684 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 C6P13671 934 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 MIPP30301 263 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 LIG3P49916 1009 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 NDST2P52849 883 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 AIF1P55008 147 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 YPEL5P62699 121 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 INPP5AQ14642 412 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 ALG11Q2TAA5 492 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 SRLQ86TD4 932 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 PLA2G15Q8NCC3 412 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 ATXN7L3BQ96GX2 97 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 PRR11Q96HE9 360 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-221ENST00000483778 VCPIP1Q96JH7 1222 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 USP29Q9HBJ7 922 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 ASCL3Q9NQ33 180 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 PARVAQ9NVD7 372 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 OR1A2Q9Y585 309 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 ENTPD2Q9Y5L3 495 aa18.17■□□□□ 0.5
ATG4B-221ENST00000483778 TCF4P15884 667 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 ERCC2P18074 760 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 LSSP48449 732 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 PPARDQ03181 441 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 PTK2BQ14289 1009 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 LRRC14Q15048 493 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 NR0B2Q15466 257 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 MACC1Q6ZN28 852 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 RD3Q7Z3Z2 195 aa18.16■□□□□ 0.5
ATG4B-221ENST00000483778 HID1Q8IV36 788 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms