RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 JCHAINP01591 159 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 ENGP17813 658 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 NFKBIAP25963 317 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 MAT2AP31153 395 aaKnown RBP16.74■□□□□ 0.27
HMGN1-214ENST00000482733 MAXP61244 160 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 GSE1Q14687 1217 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 LLGL1Q15334 1064 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 TMEM259Q4ZIN3 620 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 CCDC181Q5TID7 509 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 IL27RAQ6UWB1 636 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
HMGN1-214ENST00000482733 TFB1MQ8WVM0 346 aaKnown RBP16.74■□□□□ 0.27
HMGN1-214ENST00000482733 ALG3Q92685 438 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 HES6Q96HZ4 224 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 PDLIM2Q96JY6 352 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 IL12RB2Q99665 862 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 SEMA3CQ99985 751 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 HEMGNQ9BXL5 484 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 TMEM9BQ9NQ34 198 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 LZTFL1Q9NQ48 299 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 PPP2R2CQ9Y2T4 447 aa16.74■□□□□ 0.27
HMGN1-214ENST00000482733 HACD1B0YJ81 288 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 APOC4-APOC2K7ER74 178 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 KCNK1O00180 336 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 MTSS1O43312 755 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 HTRA2O43464 458 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 APOC2P02655 101 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 PYGMP11217 842 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 PECAM1P16284 738 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 CA4P22748 312 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 ADCY2Q08462 1091 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 XRCC4Q13426 336 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 TMEM52BQ4KMG9 183 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 FAM174AQ8TBP5 190 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 CXorf40AQ8TE69 158 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 ASB12Q8WXK4 309 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 SLC6A18Q96N87 628 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 SLC17A9Q9BYT1 436 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 AASDHPPTQ9NRN7 309 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 SAE1Q9UBE0 346 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 ZFR2Q9UPR6 939 aaKnown RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 ATP8A1Q9Y2Q0 1164 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 TTLL3Q9Y4R7 772 aa16.73■□□□□ 0.27
HMGN1-214ENST00000482733 TNRC6BQ9UPQ9 1833 aaKnown RBP16.73■□□□□ 0.27
HMGN1-214ENST00000482733 TTC24A2A3L6 582 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 VILLO15195 856 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 DDX3YO15523 660 aaKnown RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 GDF9O60383 454 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 MAGEC1O60732 1142 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 GJB3O75712 270 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 ZNF189O75820 626 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 HLA-DQB2P05538 268 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 HNRNPA2B1P22626 353 aaKnown RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 CD38P28907 300 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 AKT2P31751 481 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 C21orf59P57076 290 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 OVGP1Q12889 678 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 GRIK2Q13002 908 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 SGCGQ13326 291 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 STAT4Q14765 748 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 PRKD1Q15139 912 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 STPG1Q5TH74 334 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 SEL1L3Q68CR1 1132 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 IQCHQ86VS3 1027 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 NDUFAF2Q8N183 169 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 LRRN4Q8WUT4 740 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 FERMT1Q9BQL6 677 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 GTPBP2Q9BX10 602 aaKnown RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 C1QTNF2Q9BXJ5 285 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 PCDH12Q9NPG4 1184 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 PACSIN2Q9UNF0 486 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-214ENST00000482733 PCDHGC4Q9Y5F7 938 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 SLCO1B1Q9Y6L6 691 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
HMGN1-214ENST00000482733 A0A1B0GVT2 93 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 CFAP69A5D8W1 941 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 GOLGA6L9A6NEM1 432 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 SLC30A4O14863 429 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 SLC31A1O15431 190 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 SPINT1O43278 529 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 CER1O95813 267 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 ZBTB17Q13105 803 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 NOMO1Q15155 1222 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 RPS6KA1Q15418 735 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 RSPO4Q2I0M5 234 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-214ENST00000482733 TEX44Q53QW1 395 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 LRRC73Q5JTD7 316 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 ZSWIM9Q86XI8 627 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 MFSD2AQ8NA29 543 aa16.71■□□□□ 0.27
HMGN1-214ENST00000482733 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
HMGN1-214ENST00000482733 HAUS1Q96CS2 278 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms