RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
VPS52-218ENST00000482399 PLSCR1O15162 318 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 HTRA2O43464 458 aaPredicted RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 NPR3P17342 541 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 KCNA5P22460 613 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 ATP5F1P24539 256 aaPredicted RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 MAPK11Q15759 364 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 GRIK4Q16099 956 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 PIWIL4Q7Z3Z4 852 aaKnown RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 TRPC4APQ8TEL6 797 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 MLPHQ9BV36 600 aaPredicted RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 UNC93B1Q9H1C4 597 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 CCDC68Q9H2F9 335 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 RNF11Q9Y3C5 154 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 TRAF6Q9Y4K3 522 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 TIMM22Q9Y584 194 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 IGKV6D-21A0A0A0MT36 114 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 A0A0J9YYE9 177 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 SDHDO14521 159 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 EI24O14681 340 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 PGK1P00558 417 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 CTSHP09668 335 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 CYP2C9P11712 490 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 PROZP22891 400 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 NPY2RP49146 381 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 C1QTNF8P60827 252 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 PABPC1LQ4VXU2 614 aaKnown RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 DNAJB3Q8WWF6 145 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 ASB9Q96DX5 294 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 LRCH3Q96II8 777 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 KLHL5Q96PQ7 755 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 TBL1YQ9BQ87 522 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 TXNRD2Q9NNW7 524 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 CEPT1Q9Y6K0 416 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 PRRC2BQ5JSZ5 2229 aaKnown RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 CASTOR2A6NHX0 329 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 SUPT3HB4E1H0 165 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 MSI1O43347 362 aaKnown RBP12.8□□□□□ -0.36
VPS52-218ENST00000482399 ALBP02768 609 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 FUT4P22083 530 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 ZNF789Q5FWF6 425 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 STXBP5Q5T5C0 1151 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 NOTUMQ6P988 496 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 STK32CQ86UX6 486 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 PIM3Q86V86 326 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 DHRSXQ8N5I4 330 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 CNTD1Q8N815 330 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 TCF12Q99081 682 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 SUN2Q9UH99 717 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 FADS3Q9Y5Q0 445 aa12.8□□□□□ -0.36
VPS52-218ENST00000482399 LRRC14BA6NHZ5 514 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 TOR1BO14657 336 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 E2F6O75461 281 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 HGFP14210 728 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 MAGEA6P43360 314 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 ECT2LQ008S8 904 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 RHDQ02161 417 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 PRKCQQ04759 706 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 CARTPTQ16568 116 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 IMPG1Q17R60 797 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 TMEM214Q6NUQ4 689 aaKnown RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 NCSTNQ92542 709 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 TRIM15Q9C019 465 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 PLGRKTQ9HBL7 147 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 TRNAU1APQ9NX07 287 aaKnown RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 NDUFAF1Q9Y375 327 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 ZNF182P17025 639 aaPredicted RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 CCR1P32246 355 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 TMED10P49755 219 aaKnown RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 SLC27A1Q6PCB7 646 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 RIOX2Q8IUF8 465 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 CENPLQ8N0S6 344 aaPredicted RBP12.79□□□□□ -0.36
VPS52-218ENST00000482399 KDM1BQ8NB78 822 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 SDCCAG3Q96C92 435 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 HSFY1Q96LI6 401 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 KCNA7Q96RP8 456 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 ZFYVE28Q9HCC9 887 aa12.79□□□□□ -0.36
VPS52-218ENST00000482399 SMIM28A0A1B0GU29 152 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 MAGEB16A2A368 324 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 AGRPO00253 132 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PPP6CO00743 305 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 B4GAT1O43505 415 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 PENKP01210 267 aaPredicted RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 HMOX2P30519 316 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
VPS52-218ENST00000482399 PCID2Q5JVF3 399 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 ZNF484Q5JVG2 852 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 TMEM135Q86UB9 458 aa12.78□□□□□ -0.36
VPS52-218ENST00000482399 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms