RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 MMP20O60882 483 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 MTA2O94776 668 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PEX11BO96011 259 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ATXN1LP0C7T5 689 aaKnown RBP11.99□□□□□ -0.49
HMGN1-213ENST00000482192 SPINK2P20155 84 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 SCNN1BP51168 640 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 POLR2LP62875 67 aaKnown RBP11.99□□□□□ -0.49
HMGN1-213ENST00000482192 BCL2L1Q07817 233 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 GALNT2Q10471 571 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PAFAH1B3Q15102 231 aaKnown RBP11.99□□□□□ -0.49
HMGN1-213ENST00000482192 TCEAL1Q15170 157 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ATP13A4Q4VNC1 1196 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ANKRD20A8PQ5CZ79 823 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ZFYVE27Q5T4F4 411 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 MARC1Q5VT66 337 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 NCBP2-AS2Q69YL0 99 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 KANSL1Q7Z3B3 1105 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 SLCO6A1Q86UG4 719 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 CPNE8Q86YQ8 564 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 EID2Q8N6I1 236 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PAF1Q8N7H5 531 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PNPLA1Q8N8W4 532 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 TC2NQ8N9U0 490 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ECHDC3Q96DC8 303 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 BMFQ96LC9 184 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 PCDH12Q9NPG4 1184 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 TOR4AQ9NXH8 423 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 ATP8A1Q9Y2Q0 1164 aa11.99□□□□□ -0.49
HMGN1-213ENST00000482192 SPTY2D1-AS1A0A0U1RR47 76 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 A0A1W2PQ67 120 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MFSD11O43934 449 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 SDC3O75056 442 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 DKK1O94907 266 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 LDOC1O95751 146 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 ITIH2P19823 946 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MMP12P39900 470 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 GARSP41250 739 aaKnown RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MMP13P45452 471 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 PFN3P60673 137 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 BNIP3Q12983 259 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 PDE1CQ14123 709 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 RALGPS1Q5JS13 557 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 TIGD7Q6NT04 549 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 PARGQ86W56 976 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 ZSWIM9Q86XI8 627 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 CHCHD4Q8N4Q1 142 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 FAF2Q96CS3 445 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MRFAP1L1Q96HT8 127 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
HMGN1-213ENST00000482192 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MGME1Q9BQP7 344 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 RBSNQ9H1K0 784 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 KLK13Q9UKR3 277 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 MSRB2Q9Y3D2 182 aa11.98□□□□□ -0.49
HMGN1-213ENST00000482192 COL5A1P20908 1838 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-213ENST00000482192 LRRD1A4D1F6 860 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 FAM221BA6H8Z2 402 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 ZNF487B1APH4 448 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 H3BM21 787 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 TRAFD1O14545 582 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-213ENST00000482192 TOR1BO14657 336 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 SOCS5O75159 536 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 C6P13671 934 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 CR2P20023 1033 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 MX2P20592 715 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 DGKAP23743 735 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 KDELR1P24390 212 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 IGFALSP35858 605 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 SLC1A1P43005 524 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 LIG3P49916 1009 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 ZNF75DP51815 510 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 THOP1P52888 689 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 YPEL5P62699 121 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 PTK2BQ14289 1009 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 FZD2Q14332 565 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 LRRC14Q15048 493 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 UNQ6494/PRO21346Q6UXR6 183 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 VSIG1Q86XK7 387 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 PGBD5Q8N414 524 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 TP53I13Q8NBR0 393 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-213ENST00000482192 RAPGEF5Q92565 580 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 FATE1Q969F0 183 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 HAUS2Q9NVX0 235 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 DNAJC28Q9NX36 388 aa11.97□□□□□ -0.49
HMGN1-213ENST00000482192 TP53BP1Q12888 1972 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-213ENST00000482192 CNOT1A5YKK6 2376 aaKnown RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 SPTBN2O15020 2390 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 NEMP2A6NFY4 417 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 ENC1O14682 589 aa11.96□□□□□ -0.49
HMGN1-213ENST00000482192 HTRA2O43464 458 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-213ENST00000482192 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms