RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 CALR3Q96L12 384 aaKnown RBP10.7□□□□□ -0.7
SSBP1-210ENST00000481508 ZNF599Q96NL3 588 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 TSGA13Q96PP4 275 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 PSKH2Q96QS6 385 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 FAM118BQ9BPY3 351 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 MGME1Q9BQP7 344 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 HDAC8Q9BY41 377 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 CEP41Q9BYV8 373 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 TSGA10Q9BZW7 698 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 NT5MQ9NPB1 228 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 SEMA4GQ9NTN9 838 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 SEPT3Q9UH03 358 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 EIF2B4Q9UI10 523 aaKnown RBP10.7□□□□□ -0.7
SSBP1-210ENST00000481508 AMFRQ9UKV5 643 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 ZFR2Q9UPR6 939 aaKnown RBP10.7□□□□□ -0.7
SSBP1-210ENST00000481508 NCKAP1Q9Y2A7 1128 aa10.7□□□□□ -0.7
SSBP1-210ENST00000481508 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.7□□□□□ -0.7
SSBP1-210ENST00000481508 TCRBV7S2A1N4TA0A589 114 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TSPAN11A1L157 253 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 KCNK1O00180 336 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 MATN3O15232 486 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 SLC7A4O43246 635 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 KRT86O43790 486 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TOP3BO95985 862 aaKnown RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TIMP2P16035 220 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CCNCP24863 283 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CSNK1DP48730 415 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 SCNN1BP51168 640 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 NEK3P51956 506 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 RWDD2BP57060 319 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 BNC1Q01954 994 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 DSC2Q02487 901 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TRAF2Q12933 501 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 FGL2Q14314 439 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 ZNF235Q14590 738 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 PRKD1Q15139 912 aaPredicted RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 PTPRRQ15256 657 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 SPDYCQ5MJ68 293 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 SEL1L3Q68CR1 1132 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 KDM7AQ6ZMT4 941 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 BBS12Q6ZW61 710 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 REXO1L1PQ8IX06 675 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CCDC13Q8IYE1 715 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TXLNBQ8N3L3 684 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 ZCCHC9Q8N567 271 aaKnown RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 RNF10Q8N5U6 811 aaKnown RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CNTD1Q8N815 330 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CCNYQ8ND76 341 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CADM4Q8NFZ8 388 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 DNASE2BQ8WZ79 361 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 KLK6Q92876 244 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 SMIM14Q96QK8 99 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 NUDCD1Q96RS6 583 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 MAK16Q9BXY0 300 aaKnown RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 OSBPL8Q9BZF1 889 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 NOD2Q9HC29 1040 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 PYCARDQ9ULZ3 195 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 CA5BQ9Y2D0 317 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 PCDHGA5Q9Y5G8 931 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 FADS3Q9Y5Q0 445 aa10.69□□□□□ -0.7
SSBP1-210ENST00000481508 ASCC3Q8N3C0 2202 aaKnown RBP10.69□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3DA0A087WVF3 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3IA0A087WXS9 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3EA0A087X179 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3KA0A087X1G2 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3FA6NER0 549 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 USP27XA6NNY8 438 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3LB9A6J9 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TRAFD1O14545 582 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 RNGTTO60942 597 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 PTMAP06454 111 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3HP0C7X1 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 CCNB1P14635 433 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TGM2P21980 687 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 MAT2AP31153 395 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 PTPN7P35236 360 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 IRX4P78413 519 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 AP1B1Q10567 949 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 CSRP2Q16527 193 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 ODF2Q5BJF6 829 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 MEI1Q5TIA1 1274 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 MARC1Q5VT66 337 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3GQ6DHY5 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3CQ6IPX1 549 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TIGD7Q6NT04 549 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 FBXL19Q6PCT2 694 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 ZC3H18Q86VM9 953 aaKnown RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SYT12Q8IV01 421 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 RGL4Q8IZJ4 473 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 TBC1D3Q8IZP1 549 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-210ENST00000481508 SYCE1Q8N0S2 351 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 OR2I1PQ8NGU4 316 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 ARRDC2Q8TBH0 407 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 FOXJ1Q92949 421 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 FATE1Q969F0 183 aa10.68□□□□□ -0.7
SSBP1-210ENST00000481508 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms