RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 SLC39A8Q9C0K1 460 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 LRRC19Q9H756 370 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 SPASTQ9UBP0 616 aa13.44□□□□□ -0.26
PTPN7-212ENST00000480836 APOBEC3BQ9UH17 382 aaKnown RBP13.44□□□□□ -0.26
PTPN7-212ENST00000480836 TTC24A2A3L6 582 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-212ENST00000480836 CYSRT1A8MQ03 144 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 STAT1P42224 750 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 ERVPABLB-1P60509 514 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 INPP5AQ14642 412 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 NCAPHQ15003 741 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 NR0B2Q15466 257 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 UGP2Q16851 508 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-212ENST00000480836 FAXCQ5TGI0 409 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 FOXR1Q6PIV2 292 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 UMODL1-AS1Q8N2C9 162 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 MSANTD4Q8NCY6 345 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 C3orf20Q8ND61 904 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 KCNE4Q8WWG9 221 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 GDAP1L1Q96MZ0 367 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 PEBP4Q96S96 227 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 OSBPL1AQ9BXW6 950 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 CPEB1Q9BZB8 566 aaKnown RBP13.43□□□□□ -0.26
PTPN7-212ENST00000480836 TRIM7Q9C029 511 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 RETREG1Q9H6L5 497 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 PCDH12Q9NPG4 1184 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 TMEM51Q9NW97 253 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 DKK3Q9UBP4 350 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 GULP1Q9UBP9 304 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 PADI4Q9UM07 663 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 OR1A2Q9Y585 309 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 LRP4O75096 1905 aa13.43□□□□□ -0.26
PTPN7-212ENST00000480836 HELZ2Q9BYK8 2649 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 H3BM21 787 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 AGRPO00253 132 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 NOBOXO60393 691 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 FUCA1P04066 466 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 C6P13671 934 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 HGFP14210 728 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 ETFBP38117 255 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 LIG3P49916 1009 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 ZNF143P52747 638 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 THOP1P52888 689 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 RHOAP61586 193 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 YPEL5P62699 121 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 CCL7P80098 99 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 CFHR1Q03591 330 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 RALGDSQ12967 914 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 PTPRRQ15256 657 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 KIAA1614Q5VZ46 1190 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 RBM43Q6ZSC3 357 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 CYP4V2Q6ZWL3 525 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 RD3Q7Z3Z2 195 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 ZNF354CQ86Y25 554 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 HID1Q8IV36 788 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 ARHGAP12Q8IWW6 846 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 LSMEM2Q8N112 164 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 KYQ8NBH2 561 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 TSEN2Q8NCE0 465 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 CCL4L1Q8NHW4 92 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 SNRNP27Q8WVK2 155 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 MCEEQ96PE7 176 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 APOOQ9BUR5 198 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 SELENOOQ9BVL4 669 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 SUV39H2Q9H5I1 410 aa13.42□□□□□ -0.26
PTPN7-212ENST00000480836 MRPL40Q9NQ50 206 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 LIMA1Q9UHB6 759 aaKnown RBP13.42□□□□□ -0.26
PTPN7-212ENST00000480836 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 A8MX80 341 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 TNFSF15O95150 251 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 ANXA6P08133 673 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 NSFP46459 744 aaKnown RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 HK3P52790 923 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 GEMIN4P57678 1058 aaKnown RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 YBEYP58557 167 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 PPARDQ03181 441 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 CLN3Q13286 438 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 LRRC14Q15048 493 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 TGIF1Q15583 401 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 CT47A1Q5JQC4 288 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 ENPP7Q6UWV6 458 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 TRIM72Q6ZMU5 477 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 RBM44Q6ZP01 1051 aaKnown RBP13.41□□□□□ -0.26
PTPN7-212ENST00000480836 MCOLN2Q8IZK6 566 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 NPWQ8N729 165 aa13.41□□□□□ -0.26
PTPN7-212ENST00000480836 LSM14AQ8ND56 463 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms