RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 IRF4Q15306 451 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 NR0B2Q15466 257 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 TCEA2Q15560 299 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 ASIC2Q16515 512 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 CA9Q16790 459 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 TBC1D25Q3MII6 688 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 ANO6Q4KMQ2 910 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 PPP1R2P3Q6NXS1 205 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 MACC1Q6ZN28 852 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 TP53I13Q8NBR0 393 aaPredicted RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 BBC3Q96PG8 261 aaPredicted RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 LRRC61Q9BV99 259 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 CPEB1Q9BZB8 566 aaKnown RBP15.4■□□□□ 0.06
LIMS3-203ENST00000480744 DONSONQ9NYP3 566 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 NCKIPSDQ9NZQ3 722 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 SALL4Q9UJQ4 1053 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 PTPRQQ9UMZ3 2332 aa15.4■□□□□ 0.06
LIMS3-203ENST00000480744 FASNP49327 2511 aaKnown RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 ARHGAP42A6NI28 874 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 MUSKO15146 869 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PRAMEF11O60813 436 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 GCATO75600 419 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PRKCGP05129 697 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 ANXA6P08133 673 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 TGM2P21980 687 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 HTR7P34969 479 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PAPOLAP51003 745 aaKnown RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 NDST2P52849 883 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PPARDQ03181 441 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 LRRC14Q15048 493 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 TMEM52BQ4KMG9 183 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PPP6R3Q5H9R7 873 aaPredicted RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 ERAP2Q6P179 960 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 GLMNQ92990 594 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 NAF1Q96HR8 494 aaKnown RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 VCPIP1Q96JH7 1222 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 KCTD15Q96SI1 283 aaPredicted RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 LGMNQ99538 433 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 SNRNP25Q9BV90 132 aaKnown RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 SLC39A8Q9C0K1 460 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 SUV39H2Q9H5I1 410 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 LRRC19Q9H756 370 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 SYNDIG1Q9H7V2 258 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PDFQ9HBH1 243 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PCDH12Q9NPG4 1184 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 PNMA8BQ9ULN7 279 aaPredicted RBP15.39■□□□□ 0.05
LIMS3-203ENST00000480744 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 DOLKQ9UPQ8 538 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 RAI2Q9Y5P3 530 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 LOC400499M0QZD8 3231 aa15.39■□□□□ 0.05
LIMS3-203ENST00000480744 DFFAO00273 331 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 TPP1O14773 563 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 PRPSAP2O60256 369 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 LZTS3O60299 673 aaPredicted RBP15.38■□□□□ 0.05
LIMS3-203ENST00000480744 PALMO75781 387 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 RNF8O76064 485 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 C6P13671 934 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 TSHRP16473 764 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 RPIAP49247 311 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 SUOXP51687 545 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 GRM3Q14832 879 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 UGP2Q16851 508 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 ERMARDQ5T6L9 678 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 PLEKHA7Q6IQ23 1121 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 CAVIN1Q6NZI2 390 aaKnown RBP15.38■□□□□ 0.05
LIMS3-203ENST00000480744 RD3Q7Z3Z2 195 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 CAMK1DQ8IU85 385 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 HID1Q8IV36 788 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 FCRL3Q96P31 734 aaPredicted RBP15.38■□□□□ 0.05
LIMS3-203ENST00000480744 PEBP4Q96S96 227 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 SYT11Q9BT88 431 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 HAUS4Q9H6D7 363 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 SP110Q9HB58 689 aa15.38■□□□□ 0.05
LIMS3-203ENST00000480744 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
LIMS3-203ENST00000480744 CNOT8Q9UFF9 292 aaKnown RBP15.38■□□□□ 0.05
LIMS3-203ENST00000480744 TSPAN11A1L157 253 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 EME2A4GXA9 379 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 LMO7DNF2Z398 122 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TOR1BO14657 336 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 BUB1BO60566 1050 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 PCCBP05166 539 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 CELA2BP08218 269 aaPredicted RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 CTSEP14091 401 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ERCC2P18074 760 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 RGRP47804 291 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 LIG3P49916 1009 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 PCBP4P57723 403 aaKnown RBP15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ISXQ2M1V0 245 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 WSCD2Q2TBF2 565 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 C3orf38Q5JPI3 329 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 PERM1Q5SV97 790 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 C6orf132Q5T0Z8 1188 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 BRAT1Q6PJG6 821 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 SRLQ86TD4 932 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ZSWIM9Q86XI8 627 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 SLC35F3Q8IY50 421 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 ARFGAP1Q8N6T3 406 aa15.37■□□□□ 0.05
LIMS3-203ENST00000480744 TSEN2Q8NCE0 465 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms