RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
LINC00173-203ENST00000480237 NOD2Q9HC29 1040 aa10.54□□□□□ -0.72
LINC00173-203ENST00000480237 CDH7Q9ULB5 785 aa10.54□□□□□ -0.72
LINC00173-203ENST00000480237 MAGEB16A2A368 324 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 CD160O95971 181 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 IGSF6O95976 241 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 KRT15P19012 456 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 CR2P20023 1033 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 GBP2P32456 591 aaPredicted RBP10.53□□□□□ -0.72
LINC00173-203ENST00000480237 PPP2R2AP63151 447 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 CDK18Q07002 472 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 NR1H3Q13133 447 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 GALNT3Q14435 633 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 DMC1Q14565 340 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 SMAD1Q15797 465 aaKnown RBP10.53□□□□□ -0.72
LINC00173-203ENST00000480237 PCID2Q5JVF3 399 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 SIRPB2Q5JXA9 342 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 ATXN7L2Q5T6C5 722 aaPredicted RBP10.53□□□□□ -0.72
LINC00173-203ENST00000480237 DENND5AQ6IQ26 1287 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 RANBP10Q6VN20 620 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 LRRC6Q86X45 466 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 AHI1Q8N157 1196 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 ARFGAP2Q8N6H7 521 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 PAF1Q8N7H5 531 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 NAT16Q8N8M0 369 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 TADA1Q96BN2 335 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 ASIC4Q96FT7 647 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 CERS2Q96G23 380 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 ZFYVE19Q96K21 471 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 RIPOR3Q96MK2 946 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 LRRC3BQ96PB8 259 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 SLC2A11Q9BYW1 496 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 PLAC1Q9HBJ0 212 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 THG1LQ9NWX6 298 aaKnown RBP10.53□□□□□ -0.72
LINC00173-203ENST00000480237 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 EURLQ9NYK6 297 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 ZFATQ9P243 1243 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 INTS6Q9UL03 887 aaKnown RBP10.53□□□□□ -0.72
LINC00173-203ENST00000480237 TCAF1Q9Y4C2 921 aa10.53□□□□□ -0.72
LINC00173-203ENST00000480237 HEATR9A2RTY3 570 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 FAM159BA6NKW6 160 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 K7ERQ8 282 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SMAD6O43541 496 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 NDST3O95803 873 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MT-CO1P00395 513 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ARSAP15289 507 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 POLR2EP19388 210 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 FCARP24071 287 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 NMBRP28336 390 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MTHFRP42898 656 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 STK19P49842 368 aaPredicted RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ATP1A2P50993 1020 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 AP1S1P61966 158 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SULT2A1Q06520 285 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MGAT5Q09328 741 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 NAB1Q13506 487 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 IHHQ14623 411 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ANKRD20A4Q4UJ75 823 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 C22orf39Q6P5X5 142 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 KDM7AQ6ZMT4 941 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MARK2Q7KZI7 788 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SRLQ86TD4 932 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SLC26A11Q86WA9 606 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 YAF2Q8IY57 180 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 UNC5BQ8IZJ1 945 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ADGRG2Q8IZP9 1017 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 RYBPQ8N488 228 aaPredicted RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 PDCD6IPQ8WUM4 868 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 DCAKDQ8WVC6 231 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 SLC44A1Q8WWI5 657 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 TTC17Q96AE7 1141 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 E2F7Q96AV8 911 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 LMLNQ96KR4 655 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 RPL10LQ96L21 214 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 DHRS4Q9BTZ2 278 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 KIFC1Q9BW19 673 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 EBF3Q9H4W6 596 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 TRPV4Q9HBA0 871 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ARNT2Q9HBZ2 717 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 MRM3Q9HC36 420 aaKnown RBP10.52□□□□□ -0.72
LINC00173-203ENST00000480237 ZFP14Q9HCL3 533 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 CHRAC1Q9NRG0 131 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 IL1RAPL1Q9NZN1 696 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 CLEC1BQ9P126 229 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 TXNDC16Q9P2K2 825 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 CHKBQ9Y259 395 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 RAI2Q9Y5P3 530 aa10.52□□□□□ -0.72
LINC00173-203ENST00000480237 F5P12259 2224 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 EYSQ5T1H1 3165 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 TMEM265A0A087WTH1 108 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 IQANK1A0A1B0GTG1 560 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 LOC285095A0A1B0GVY8 99 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.73
LINC00173-203ENST00000480237 HOXC11O43248 304 aaPredicted RBP10.52□□□□□ -0.73
LINC00173-203ENST00000480237 ALDH1A2O94788 518 aa10.52□□□□□ -0.73
LINC00173-203ENST00000480237 ATXN1LP0C7T5 689 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms