RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 UPK3BL1B0FP48 263 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PRR5-ARHGAP8B1AHC4 643 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 UPK3BL2E5RIL1 263 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 H7C0C1 242 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 NEMP1O14524 444 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 AREL1O15033 823 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PCDH8O95206 1070 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF806P0C7X5 589 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 RBP3P10745 1247 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 TIMP2P16035 220 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 CA4P22748 312 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PTPN3P26045 913 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 MAOBP27338 520 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ABL2P42684 1182 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ATP5OP48047 213 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 EIF3EP60228 445 aaKnown RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PPP2CBP62714 309 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 RPS21P63220 83 aaKnown RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PPP2CAP67775 309 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 CSRP2Q16527 193 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 DUOXA1Q1HG43 343 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF569Q5MCW4 686 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 KIAA1161Q6NSJ0 714 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ERAP2Q6P179 960 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 B4GALNT4Q76KP1 1039 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PRPF39Q86UA1 669 aaKnown RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 SLC13A5Q86YT5 568 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 CDKL3Q8IVW4 592 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 DCLK2Q8N568 766 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ARRDC2Q8TBH0 407 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 NSMCE3Q96MG7 304 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 AGAP3Q96P47 875 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 SLC25A51Q9H1U9 297 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 SEMA4GQ9NTN9 838 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 EIF2B4Q9UI10 523 aaKnown RBP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PYCARDQ9ULZ3 195 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 DMTF1Q9Y222 760 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 RAI2Q9Y5P3 530 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
ATG4B-219ENST00000479941 CEP192Q8TEP8 1941 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 ATXN2Q99700 1313 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 A0A1B0GTW7 788 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 A0A1W2PQU0 124 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 USP27XA6NNY8 438 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 KHNYNO15037 678 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 BCAT2O15382 392 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 FZD6O60353 706 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TGM1P22735 817 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 RBL1P28749 1068 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 DSC2Q02487 901 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 NIPAL4Q0D2K0 466 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 WASHC5Q12768 1159 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TRAF2Q12933 501 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TMEM52BQ4KMG9 183 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TMEM259Q4ZIN3 620 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 SETMARQ53H47 684 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 ARMC12Q5T9G4 340 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 DARS2Q6PI48 645 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 SLC23A3Q6PIS1 610 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 ALYREFQ86V81 257 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 ZSWIM9Q86XI8 627 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 NDUFAF2Q8N183 169 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 C1orf216Q8TAB5 229 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 CXorf40AQ8TE69 158 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 PDCD6IPQ8WUM4 868 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 MAIP1Q8WWC4 291 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 IMP4Q96G21 291 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 ORAI3Q9BRQ5 295 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TDRD1Q9BXT4 1180 aaKnown RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 CEP41Q9BYV8 373 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 FRMD8P1Q9BZ68 369 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 MIR1-1HGQ9H1L0 117 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 GLOD4Q9HC38 313 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 KLHL8Q9P2G9 620 aaPredicted RBP10.91□□□□□ -0.66
ATG4B-219ENST00000479941 TRHDEQ9UKU6 1024 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 PHTF1Q9UMS5 762 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
ATG4B-219ENST00000479941 CACNA1EQ15878 2313 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ENC1O14682 589 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SPINT1O43278 529 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 STK10O94804 968 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 PGLSO95336 258 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 CPP00450 1065 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 MMP2P08253 660 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 MAT2AP31153 395 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 CD86P42081 329 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 AFF3P51826 1226 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 RPL26P61254 145 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 RACK1P63244 317 aaKnown RBP10.9□□□□□ -0.66
ATG4B-219ENST00000479941 FAM193AP78312 1265 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SKOR1P84550 965 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 SLC14A2Q15849 920 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 CCDC6Q16204 474 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF284Q2VY69 593 aa10.9□□□□□ -0.66
ATG4B-219ENST00000479941 TRIM61Q5EBN2 209 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms