RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 ERCC2P18074 760 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 PTMSP20962 102 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 HTR1BP28222 390 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 IGFALSP35858 605 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 CSNK1DP48730 415 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 HCAR3P49019 387 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 RENBPP51606 427 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 UBASH3AP57075 661 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 PFN3P60673 137 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 INSM1Q01101 510 aaPredicted RBP8.82□□□□□ -1
XRCC6-208ENST00000478914 SEMG2Q02383 582 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 IL10RBQ08334 325 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 RFTN1Q14699 578 aaPredicted RBP8.82□□□□□ -1
XRCC6-208ENST00000478914 NR1I3Q14994 352 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 LRRC14Q15048 493 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 IQCB1Q15051 598 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 NFKBIBQ15653 356 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 CA9Q16790 459 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 KLHL40Q2TBA0 621 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 TMEM52BQ4KMG9 183 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 FIGNQ5HY92 759 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 LRRC69Q6ZNQ3 347 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 SRLQ86TD4 932 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 PHACTR4Q8IZ21 702 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 CACTIN-AS1Q8N1I8 211 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 BBS5Q8N3I7 341 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 LZTR1Q8N653 840 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 FAM181AQ8N9Y4 354 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 ATL2Q8NHH9 583 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 LMX1AQ8TE12 382 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 HNRNPLLQ8WVV9 542 aaKnown RBP8.82□□□□□ -1
XRCC6-208ENST00000478914 RFFLQ8WZ73 363 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 CENPTQ96BT3 561 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 IQCDQ96DY2 449 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 DCBLD2Q96PD2 775 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 DEPDC7Q96QD5 511 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 PEBP4Q96S96 227 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
XRCC6-208ENST00000478914 PDFQ9HBH1 243 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 APOBEC3BQ9UH17 382 aaKnown RBP8.82□□□□□ -1
XRCC6-208ENST00000478914 DOLKQ9UPQ8 538 aa8.82□□□□□ -1
XRCC6-208ENST00000478914 ZZEF1O43149 2961 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 A0A1W2PQJ5 194 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TSPAN11A1L157 253 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 CPED1A4D0V7 1026 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TPP1O14773 563 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 RRP8O43159 456 aaKnown RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 OPA1O60313 960 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 LRCH4O75427 683 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 MT-CO3P00414 261 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 SERPING1P05155 500 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TPM3P06753 285 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 ANXA6P08133 673 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 CTSEP14091 401 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 ITIH2P19823 946 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 NFKBIAP25963 317 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 SERPINB6P35237 376 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 PCK1P35558 622 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 RPIAP49247 311 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 BLKP51451 505 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 POLR2LP62875 67 aaKnown RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 FANCCQ00597 558 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 PPARDQ03181 441 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 BCL2L1Q07817 233 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 PIGHQ14442 188 aaPredicted RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 ZNF235Q14590 738 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 IRF4Q15306 451 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 NR0B2Q15466 257 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 UGP2Q16851 508 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 COL28A1Q2UY09 1125 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 DEFB133Q30KQ1 61 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 BOLA3Q53S33 107 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 E4F1Q66K89 784 aaPredicted RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 TMCO3Q6UWJ1 677 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 MACC1Q6ZN28 852 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 LUZP1Q86V48 1076 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 CAMK1DQ8IU85 385 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 ARFGAP1Q8N6T3 406 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TP53I13Q8NBR0 393 aaPredicted RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 IFI44Q8TCB0 444 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 MAPK15Q8TD08 544 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 NSMCE1Q8WV22 266 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
XRCC6-208ENST00000478914 HSPH1Q92598 858 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TBATAQ96M53 351 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 FUCA2Q9BTY2 467 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 TRIM7Q9C029 511 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 ISCUQ9H1K1 167 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 CBX8Q9HC52 389 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 PCDH12Q9NPG4 1184 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 SEPT3Q9UH03 358 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 SALL4Q9UJQ4 1053 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 COQ6Q9Y2Z9 468 aa8.81□□□□□ -1
XRCC6-208ENST00000478914 RP1P56715 2156 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms