RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SRP54P61011 504 aaKnown RBP17.37■□□□□ 0.37
VIM-204ENST00000478746 LRRC14Q15048 493 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 IRF4Q15306 451 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 SKIDA1Q1XH10 827 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 BORAQ6PGQ7 559 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 GPR156Q8NFN8 814 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 NELFBQ8WX92 580 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 ARHGEF2Q92974 986 aaKnown RBP17.37■□□□□ 0.37
VIM-204ENST00000478746 WRAP53Q9BUR4 548 aaKnown RBP17.37■□□□□ 0.37
VIM-204ENST00000478746 PPARGC1AQ9UBK2 798 aaKnown RBP17.37■□□□□ 0.37
VIM-204ENST00000478746 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
VIM-204ENST00000478746 HPCAL4Q9UM19 191 aa17.37■□□□□ 0.37
VIM-204ENST00000478746 NBASA2RRP1 2371 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 BICDL2A1A5D9 508 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 TNFP01375 233 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 TIMP2P16035 220 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 PNLIPP16233 465 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 CR2P20023 1033 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 MARSP56192 900 aaKnown RBP17.36■□□□□ 0.37
VIM-204ENST00000478746 RAD51Q06609 339 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 ARHGEF7Q14155 803 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 NFATC4Q14934 902 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 IGFBP7Q16270 282 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 PHF19Q5T6S3 580 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 TRIM65Q6PJ69 517 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 ATL2Q8NHH9 583 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 JPH3Q8WXH2 748 aaPredicted RBP17.36■□□□□ 0.37
VIM-204ENST00000478746 VOPP1Q96AW1 172 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 APOOQ9BUR5 198 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 SLC12A9Q9BXP2 914 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 B3GNT4Q9C0J1 378 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 EPN3Q9H201 632 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 AKAP7Q9P0M2 348 aaPredicted RBP17.36■□□□□ 0.37
VIM-204ENST00000478746 KLQ9UEF7 1012 aa17.36■□□□□ 0.37
VIM-204ENST00000478746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.35■□□□□ 0.37
VIM-204ENST00000478746 SLC9A1P19634 815 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 KCNAB2Q13303 367 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 INPP5AQ14642 412 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 CERCAMQ5T4B2 595 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 ATXN7L2Q5T6C5 722 aaPredicted RBP17.35■□□□□ 0.37
VIM-204ENST00000478746 FOXR2Q6PJQ5 311 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 OGFOD3Q6PK18 319 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 SPRED1Q7Z699 444 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 SLITRK4Q8IW52 837 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 FAM46DQ8NEK8 389 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 SHC3Q92529 594 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 RBM15Q96T37 977 aaKnown RBP eCLIP17.35■□□□□ 0.37
VIM-204ENST00000478746 PLCB1Q9NQ66 1216 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 LRIT1Q9P2V4 623 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 COQ6Q9Y2Z9 468 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 ZFC3H1O60293 1989 aaKnown RBP17.35■□□□□ 0.37
VIM-204ENST00000478746 CHD5Q8TDI0 1954 aa17.35■□□□□ 0.37
VIM-204ENST00000478746 PPP1R3GB7ZBB8 358 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 STMND1H3BQB6 276 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 XPAP23025 273 aaPredicted RBP17.34■□□□□ 0.37
VIM-204ENST00000478746 FOXK1P85037 733 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 TMEM52BQ4KMG9 183 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 FAM102AQ5T9C2 384 aaPredicted RBP17.34■□□□□ 0.37
VIM-204ENST00000478746 NYAP1Q6ZVC0 841 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 TMPRSS9Q7Z410 1059 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 TAF8Q7Z7C8 310 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 FAM131BQ86XD5 332 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 SEMA6CQ9H3T2 930 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 NDFIP2Q9NV92 336 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 DKK3Q9UBP4 350 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 APEX2Q9UBZ4 518 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 DNAI1Q9UI46 699 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 CTNND2Q9UQB3 1225 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 OR1A2Q9Y585 309 aa17.34■□□□□ 0.37
VIM-204ENST00000478746 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 CASRP41180 1078 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 ATP1A2P50993 1020 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 POLE2P56282 527 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 STX17P56962 302 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 APBA1Q02410 837 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 ELP6Q0PNE2 266 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 SERINC3Q13530 473 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 C16orf72Q14CZ0 275 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 C14orf28Q4W4Y0 310 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 RWDD4Q6NW29 188 aaKnown RBP17.33■□□□□ 0.36
VIM-204ENST00000478746 PIM3Q86V86 326 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 IRF2BP1Q8IU81 584 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 NKD1Q969G9 470 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 C18orf8Q96DM3 657 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 WDR92Q96MX6 357 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 GDAP1L1Q96MZ0 367 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 MAGEH1Q9H213 219 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 PDCL3Q9H2J4 239 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 RETREG1Q9H6L5 497 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 OR12D3Q9UGF7 316 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 TUBD1Q9UJT1 453 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 MAN2B2Q9Y2E5 1009 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 DGKBQ9Y6T7 804 aa17.33■□□□□ 0.36
VIM-204ENST00000478746 RELNP78509 3460 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 LRRK1Q38SD2 2015 aa17.32■□□□□ 0.36
VIM-204ENST00000478746 USP9YO00507 2555 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms