RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PRAMEF19Q5SWL8 479 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 INO80CQ6PI98 192 aaPredicted RBP4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 SFTPA2Q8IWL1 248 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 MB21D2Q8IYB1 491 aaPredicted RBP4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 GPT2Q8TD30 523 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 SAAL1Q96ER3 474 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 BBS4Q96RK4 519 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 SIN3AQ96ST3 1273 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 H2AFJQ9BTM1 129 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 MSTO1Q9BUK6 570 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 PDCL3Q9H2J4 239 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 TAS2R10Q9NYW0 307 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 ZNF69Q9UC07 566 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 MYO6Q9UM54 1294 aa4.09□□□□□ -1.75
SMARCA1-204ENST00000478420 CKAP5Q14008 2032 aa4.09□□□□□ -1.76
SMARCA1-204ENST00000478420 EPB41L2O43491 1005 aaKnown RBP4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 TNFSF14O43557 240 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 SOX30O94993 753 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 ALPLP05186 524 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 HOXC6P09630 235 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 EDN2P20800 178 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 DDIT3P35638 169 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 MLH1P40692 756 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 CXCR3P49682 368 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 CTCFP49711 727 aaPredicted RBP4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 EFNA5P52803 228 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 NUDT6P53370 316 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 EIF3BP55884 814 aaKnown RBP4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 ADORA2A-AS1P86434 159 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 DSC1Q08554 894 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 MYBPC2Q14324 1141 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 HNF4GQ14541 408 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 PPP2R5BQ15173 497 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 ESCO2Q56NI9 601 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 SLC46A3Q7Z3Q1 461 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 PARP16Q8N5Y8 322 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 TEX19Q8NA77 164 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 RFFLQ8WZ73 363 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 NEUROD6Q96NK8 337 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 CAMK1GQ96NX5 476 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 NTPCRQ9BSD7 190 aaKnown RBP4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 ZHX3Q9H4I2 956 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 SMYD2Q9NRG4 433 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 TMEM51Q9NW97 253 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 PCDHA7Q9UN72 937 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 NAALADL1Q9UQQ1 740 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM96BQ9Y3D0 163 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 A3GALT2U3KPV4 340 aa4.08□□□□□ -1.76
SMARCA1-204ENST00000478420 A0A0U1RQF3 1178 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 A0A1W2PPH5 198 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 A0A1W2PQM1 296 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 RGS11O94810 467 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 MT-CYBP00156 380 aaPredicted RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 EPHA8P29322 1005 aaPredicted RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 CDKN2AP42771 156 aaKnown RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 GABRB2P47870 512 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 HARS2P49590 506 aaKnown RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 ABATP80404 500 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 MPP1Q00013 466 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 Q0VFX4 171 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 RNPS1Q15287 305 aaKnown RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 SOWAHAQ2M3V2 549 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 SLC4A8Q2Y0W8 1093 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 TXNDC8Q6A555 127 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 ZNF280DQ6N043 979 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 PDXDC1Q6P996 788 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 ATF7IPQ6VMQ6 1270 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 CCDC105Q8IYK2 499 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 FBXL14Q8N1E6 418 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 ZCCHC9Q8N567 271 aaKnown RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 OR14A16Q8NHC5 309 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 SNAPC3Q92966 411 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 MPP4Q96JB8 637 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 NR1H4Q96RI1 486 aaPredicted RBP4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 MXRA8Q9BRK3 442 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 CYSLTR2Q9NS75 346 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 A4GNTQ9UNA3 340 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 PAM16Q9Y3D7 125 aa4.07□□□□□ -1.76
SMARCA1-204ENST00000478420 IGHV4-28A0A0C4DH34 117 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 A0A1B0GVM2 712 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM90A8PA6NJQ4 464 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 BCAT2O15382 392 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 NDUFB4O95168 129 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 RTN3O95197 1032 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 MBD4O95243 580 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 TFP02787 698 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 LDHCP07864 332 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 HSP90AA1P07900 732 aaKnown RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM90A13PP0C7W8 464 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 FAM90A24PP0C7X0 464 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 UBL4AP11441 157 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 ETFAP13804 333 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 HOXA11P31270 313 aaPredicted RBP4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 CPOXP36551 454 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 PCYT1AP49585 367 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 GNAQP50148 359 aa4.06□□□□□ -1.76
SMARCA1-204ENST00000478420 HTR6P50406 440 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms