RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LSSP48449 732 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 POLR2LP62875 67 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 GABREP78334 506 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 TYRO3Q06418 890 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 ASIC2Q16515 512 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 CDKN3Q16667 212 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 UGP2Q16851 508 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 KLHL40Q2TBA0 621 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 DEFB133Q30KQ1 61 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 TMEM52BQ4KMG9 183 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 C6orf132Q5T0Z8 1188 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 TMCO4Q5TGY1 634 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 RBM44Q6ZP01 1051 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 EFL1Q7Z2Z2 1120 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 LZTR1Q8N653 840 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 FNIP1Q8TF40 1166 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 BPIFA3Q9BQP9 254 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 WRAP53Q9BUR4 548 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 CINPQ9BW66 212 aaPredicted RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 SUV39H2Q9H5I1 410 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 DHX35Q9H5Z1 703 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 NOL6Q9H6R4 1146 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 ZWILCHQ9H900 591 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 MRPL47Q9HD33 250 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 LHX3Q9UBR4 397 aa14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 GOLGA4Q13439 2230 aaKnown RBP14.59□□□□□ -0.07
SMARCE1-209ENST00000478349 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 CFAP69A5D8W1 941 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 TK2O00142 265 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 SPINT1O43278 529 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 PALMO75781 387 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 GZMAP12544 262 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 CTSEP14091 401 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 TIMP2P16035 220 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 KELP23276 732 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 RBMS1P29558 406 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 MLLT3P42568 568 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 CSNK1DP48730 415 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 RENBPP51606 427 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 TPM4P67936 248 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 EIF2B5Q13144 721 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 MAMLD1Q13495 774 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 SOWAHCQ53LP3 525 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 LRRC73Q5JTD7 316 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 ERMARDQ5T6L9 678 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 PLEKHA7Q6IQ23 1121 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 LVRNQ6Q4G3 990 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 RFX8Q6ZV50 586 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 GKN2Q86XP6 184 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 BBS5Q8N3I7 341 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 TP53I13Q8NBR0 393 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 LSM14AQ8ND56 463 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 OR6C4Q8NGE1 309 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 CCDC97Q96F63 343 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 EXOC2Q96KP1 924 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 FCRL3Q96P31 734 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 LRRC61Q9BV99 259 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 BOCQ9BWV1 1114 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 ATP8A1Q9Y2Q0 1164 aa14.58□□□□□ -0.08
SMARCE1-209ENST00000478349 URB1O60287 2271 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 ADAMTS20P59510 1910 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 TEX51A0A1B0GUA7 166 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 A0A1W2PQ67 120 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 A0A1W2PQC6 194 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 LRRC53A6NM62 1247 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 MUSKO15146 869 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 PIGNO95427 931 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 C6P13671 934 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 ADKP55263 362 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 AP1S1P61966 158 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 BCL2L1Q07817 233 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 MTM1Q13496 603 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 NFATC4Q14934 902 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 NCAPHQ15003 741 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 AGERQ15109 404 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 IRF4Q15306 451 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 ISXQ2M1V0 245 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 IGF2-ASQ6U949 168 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 GPR155Q7Z3F1 870 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 ARL10Q8N8L6 244 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 MAGEB5Q9BZ81 275 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 PDFQ9HBH1 243 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 PCDH12Q9NPG4 1184 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 KCTD5Q9NXV2 234 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 KLQ9UEF7 1012 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 PCDHB1Q9Y5F3 818 aa14.57□□□□□ -0.08
SMARCE1-209ENST00000478349 DOCK4Q8N1I0 1966 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 LY6G6EA0A0G2JKS1 128 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 TMCO5BA8MYB1 307 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 H3BRJ5 948 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 TMX2-CTNND1H3BSU7 103 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 DFFAO00273 331 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 CACNB4O00305 520 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 MPOP05164 745 aa14.56□□□□□ -0.08
SMARCE1-209ENST00000478349 ELFN1P0C7U0 828 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms