RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NYAP1Q6ZVC0 841 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 UMODL1-AS1Q8N2C9 162 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 GRAMD1AQ96CP6 724 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 VCPIP1Q96JH7 1222 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 SLC46A1Q96NT5 459 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 WRAP53Q9BUR4 548 aaKnown RBP16.89■□□□□ 0.29
TRIM13-208ENST00000478111 CPNE5Q9HCH3 593 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
TRIM13-208ENST00000478111 BOD1L1Q8NFC6 3051 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 TSPAN11A1L157 253 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 TOR1BO14657 336 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 PIGNO95427 931 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 PDX1P52945 283 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 COPB1P53618 953 aaKnown RBP16.88■□□□□ 0.29
TRIM13-208ENST00000478111 RAD51Q06609 339 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 IRF4Q15306 451 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 WSCD2Q2TBF2 565 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 PARP15Q460N3 678 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 C3orf38Q5JPI3 329 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 EFHC2Q5JST6 749 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 FKBP15Q5T1M5 1219 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 SCYL2Q6P3W7 929 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 RBM44Q6ZP01 1051 aaKnown RBP16.88■□□□□ 0.29
TRIM13-208ENST00000478111 ZNF354CQ86Y25 554 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 ZNF843Q8N446 348 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 HCAR2Q8TDS4 363 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 KCNE4Q8WWG9 221 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
TRIM13-208ENST00000478111 COQ6Q9Y2Z9 468 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 ARHGEF17Q96PE2 2063 aaPredicted RBP16.88■□□□□ 0.29
TRIM13-208ENST00000478111 SCN8AQ9UQD0 1980 aa16.88■□□□□ 0.29
TRIM13-208ENST00000478111 CREB3O43889 395 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 BUB1BO60566 1050 aaPredicted RBP16.87■□□□□ 0.29
TRIM13-208ENST00000478111 TCEA3O75764 348 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 ANXA6P08133 673 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 PEX5P50542 639 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 SUOXP51687 545 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 OGDHQ02218 1023 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 PPARDQ03181 441 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 UGP2Q16851 508 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 FAXCQ5TGI0 409 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 CLEC17AQ6ZS10 378 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
TRIM13-208ENST00000478111 ZSWIM9Q86XI8 627 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 MCEEQ96PE7 176 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 AGPAT1Q99943 283 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 DPH1Q9BZG8 443 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 SLC13A1Q9BZW2 595 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 SUV39H2Q9H5I1 410 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 LRRC19Q9H756 370 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 THSD1Q9NS62 852 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 PADI4Q9UM07 663 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 PCDHGA8Q9Y5G5 932 aa16.87■□□□□ 0.29
TRIM13-208ENST00000478111 LRRC10BA6NIK2 292 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 LGALS16A8MUM7 142 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 CDRT15L2A8MXV6 281 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 J3KR12 359 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 ERVH48-1M5A8F1 160 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 NTN3O00634 580 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-208ENST00000478111 KLK10O43240 276 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 ZIC2O95409 532 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-208ENST00000478111 RPIAP49247 311 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 HK3P52790 923 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 AIF1P55008 147 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 UCNP55089 124 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 TMPRSS3P57727 454 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 LRRC14Q15048 493 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 AGERQ15109 404 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 ALG11Q2TAA5 492 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 ARHGAP40Q5TG30 622 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 DNAJC24Q6P3W2 148 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 NEK11Q8NG66 645 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 SNRNP27Q8WVK2 155 aaKnown RBP16.86■□□□□ 0.29
TRIM13-208ENST00000478111 GLMNQ92990 594 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 NAT6Q93015 286 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 TSACCQ96A04 125 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-208ENST00000478111 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 CCDC3Q9BQI4 270 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 CNPY3Q9BT09 278 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 C1QTNF7Q9BXJ2 289 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 CATSPERBQ9H7T0 1116 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 PCDH12Q9NPG4 1184 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 RABGEF1Q9UJ41 708 aa16.86■□□□□ 0.29
TRIM13-208ENST00000478111 PRAMEF11O60813 436 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 TPM2P07951 284 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 C6P13671 934 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 RBMS1P29558 406 aaKnown RBP16.85■□□□□ 0.29
TRIM13-208ENST00000478111 RGRP47804 291 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 ELP6Q0PNE2 266 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 BROXQ5VW32 411 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 KCTD16Q68DU8 428 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 DNAAF5Q86Y56 855 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 HID1Q8IV36 788 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 MCOLN2Q8IZK6 566 aa16.85■□□□□ 0.29
TRIM13-208ENST00000478111 FSTL5Q8N475 847 aaPredicted RBP16.85■□□□□ 0.29
TRIM13-208ENST00000478111 WDR48Q8TAF3 677 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms