RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZSWIM1Q9BR11 485 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 MIS12Q9H081 205 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 MUC3BQ9H195 1237 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TRIT1Q9H3H1 467 aaKnown RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 CUEDC2Q9H467 287 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 ZSCAN16Q9H4T2 348 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 OCEL1Q9H607 264 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TMEM8AQ9HCN3 771 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 PDP2Q9P2J9 529 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 KIAA1257Q9ULG3 409 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 FRMD4BQ9Y2L6 1034 aa7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 TMEM184BQ9Y519 407 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 MORC2Q9Y6X9 1032 aaPredicted RBP7.41□□□□□ -1.22
SPTLC1-205ENST00000477888 UNC13CQ8NB66 2214 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PRRC2CQ9Y520 2896 aaKnown RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 A0A0D9SEW6 157 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 MMP20O60882 483 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 DNAJB5O75953 348 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 TM7SF2O76062 418 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CD160O95971 181 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 TNFP01375 233 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PDCP20941 246 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 BMP6P22004 513 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 MPSTP25325 297 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 HTR1BP28222 390 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 STAT5AP42229 794 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CCNHP51946 323 aaPredicted RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CDH4P55283 916 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 MC2RQ01718 297 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 ENPEPQ07075 957 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 ERV3-1Q14264 604 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 IRF4Q15306 451 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CNGA2Q16280 664 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 ZXDCQ2QGD7 858 aaPredicted RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 KLHL40Q2TBA0 621 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 WSCD2Q2TBF2 565 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CARD16Q5EG05 197 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 NKAIN2Q5VXU1 208 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PAPD7Q5XG87 772 aaKnown RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 SPECC1LQ69YQ0 1117 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 KRT39Q6A163 491 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 FOXR2Q6PJQ5 311 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 INTS8Q75QN2 995 aaKnown RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 KDELC2Q7Z4H8 507 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 TAF8Q7Z7C8 310 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 TMEM135Q86UB9 458 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 FAM186BQ8IYM0 893 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 NRSN1Q8IZ57 195 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PCDH20Q8N6Y1 951 aaKnown RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 DCAF4L2Q8NA75 395 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 Q8NA96 180 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CCL4L1Q8NHW4 92 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 FAM149B1Q96BN6 582 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PDXPQ96GD0 296 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CTRCQ99895 268 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 APOOQ9BUR5 198 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 TRIM55Q9BYV6 548 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 CEP44Q9C0F1 390 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 BLZF1Q9H2G9 400 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 DPEP2Q9H4A9 486 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 RAB20Q9NX57 234 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 KLQ9UEF7 1012 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 SLC12A6Q9UHW9 1150 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 VANGL2Q9ULK5 521 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PHTF1Q9UMS5 762 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 POLHQ9Y253 713 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 PCDHB3Q9Y5E6 796 aa7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 OAS3Q9Y6K5 1087 aaKnown RBP7.4□□□□□ -1.22
SPTLC1-205ENST00000477888 SPG11Q96JI7 2443 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 TRPM6Q9BX84 2022 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 RHPN2P1A8MT19 583 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 B4DGG1 531 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 ZMPSTE24O75844 475 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 STK17BO94768 372 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 DLGAP3O95886 979 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 RECKO95980 971 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC2A3P11169 496 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 TIMP2P16035 220 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 ITIH2P19823 946 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 VARSP26640 1264 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 GKP32189 559 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 CCR1P32246 355 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 GTF2H1P32780 548 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 CSF2RBP32927 897 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 GPR3P46089 330 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 DNA2P51530 1060 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 MAZP56270 477 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 CEBPZQ03701 1054 aaKnown RBP7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC20A2Q08357 652 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SEMA5AQ13591 1074 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 MAP7Q14244 749 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 INPP5AQ14642 412 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC39A14Q15043 492 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 LRRC14Q15048 493 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 ALFQ53S48 1182 aa7.39□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF805Q5CZA5 627 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms