RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TTI2Q6NXR4 508 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 TMPRSS9Q7Z410 1059 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 ZDHHC17Q8IUH5 632 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 HSCBQ8IWL3 235 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 PSMG3-AS1Q96PY0 264 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 RBM15Q96T37 977 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SCAND2PQ9GZW5 306 aaPredicted RBP20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SYNCQ9H7C4 482 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 TMEM51Q9NW97 253 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 SDK2Q58EX2 2172 aa20.48■□□□□ 0.87
PDLIM1-202ENST00000477757 POP4O95707 220 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 ACVRL1P37023 503 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 ETFBP38117 255 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 SRP54P61011 504 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 SNRPD1P62314 119 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 C16orf72Q14CZ0 275 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 MYLK3Q32MK0 819 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 PHF19Q5T6S3 580 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 TMEM164Q5U3C3 297 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 RD3Q7Z3Z2 195 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 TTC7BQ86TV6 843 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 FAM26EQ8N5C1 309 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 PDXPQ96GD0 296 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 HAPLN3Q96S86 360 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 TBCBQ99426 244 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 WRAP53Q9BUR4 548 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 PPARGC1AQ9UBK2 798 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 KLQ9UEF7 1012 aa20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 SPTBN1Q01082 2364 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 SPENQ96T58 3664 aaKnown RBP20.47■□□□□ 0.87
PDLIM1-202ENST00000477757 ZFC3H1O60293 1989 aaKnown RBP20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 USP8P40818 1118 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 ATP1A2P50993 1020 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 MARSP56192 900 aaKnown RBP20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 LRRC14Q15048 493 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 WSCD2Q2TBF2 565 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 SLC25A52Q3SY17 297 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 FOXR2Q6PJQ5 311 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 OGFOD3Q6PK18 319 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 ENPP7Q6UWV6 458 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 GDPD4Q6W3E5 623 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 NYAP1Q6ZVC0 841 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 FMR1NBQ8N0W7 255 aaPredicted RBP20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 ATL2Q8NHH9 583 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 JPH3Q8WXH2 748 aaPredicted RBP20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 SMARCE1Q969G3 411 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 NKD1Q969G9 470 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 DGKBQ9Y6T7 804 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 CHD5Q8TDI0 1954 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 LRRK1Q38SD2 2015 aa20.46■□□□□ 0.87
PDLIM1-202ENST00000477757 CD44P16070 742 aaKnown RBP20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 HLTFQ14527 1009 aaKnown RBP eCLIP20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 C14orf28Q4W4Y0 310 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 ATXN7L2Q5T6C5 722 aaPredicted RBP20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 KCTD16Q68DU8 428 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 GJB7Q6PEY0 223 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 TRIM65Q6PJ69 517 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 SHC3Q92529 594 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 WDR92Q96MX6 357 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 SEMA6CQ9H3T2 930 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 AKAP7Q9P0M2 348 aaPredicted RBP20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 DKK3Q9UBP4 350 aa20.45■□□□□ 0.86
PDLIM1-202ENST00000477757 NUDT21O43809 227 aaKnown RBP20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 ITIH2P19823 946 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 SCNN1AP37088 669 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 PPP1R2P41236 205 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 CCR10P46092 362 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 TMEM52BQ4KMG9 183 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 C4orf17Q53FE4 359 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 EFHC2Q5JST6 749 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 GDAP1L1Q96MZ0 367 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 APOOQ9BUR5 198 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 LRIT1Q9P2V4 623 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 COQ6Q9Y2Z9 468 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 ZDHHC9Q9Y397 364 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 OR1A2Q9Y585 309 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 PCDHGA3Q9Y5H0 932 aa20.44■□□□□ 0.86
PDLIM1-202ENST00000477757 HGSO14964 777 aaPredicted RBP20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 GNA14O95837 355 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 CCL4P13236 92 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 MAPKAPK2P49137 400 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 SUOXP51687 545 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 ARSDP51689 593 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 ARHGEF7Q14155 803 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 INPP5AQ14642 412 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 ARHGAP44Q17R89 818 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 BNIPLQ7Z465 357 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 SFTPA2Q8IWL1 248 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 GPBAR1Q8TDU6 330 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 NDFIP2Q9NV92 336 aa20.43■□□□□ 0.86
PDLIM1-202ENST00000477757 B4DGG1 531 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 CPNE6O95741 557 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 TNFP01375 233 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 LIFP15018 202 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 TIMP2P16035 220 aa20.42■□□□□ 0.86
PDLIM1-202ENST00000477757 ELP6Q0PNE2 266 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms