RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SEPT3Q9UH03 358 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-203ENST00000477626 K7ERQ8 282 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 ZNF195O14628 629 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 TSPAN3O60637 253 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 S1PR4O95977 384 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 LRG1P02750 347 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 IRF1P10914 325 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 OCRLQ01968 901 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 LEKR1Q6ZMV7 388 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 SCG3Q8WXD2 468 aaKnown RBP12.22□□□□□ -0.45
PRPF39-203ENST00000477626 UBXN10Q96LJ8 280 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 BFARQ9NZS9 450 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 MARCH4Q9P2E8 410 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-203ENST00000477626 HAO1Q9UJM8 370 aa12.22□□□□□ -0.45
PRPF39-203ENST00000477626 MTF2Q9Y483 593 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-203ENST00000477626 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-203ENST00000477626 FGF1P05230 155 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 RHOCP08134 193 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 FGF3P11487 239 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 EML3Q32P44 896 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 TMEM25Q86YD3 366 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 DENND6AQ8IWF6 608 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 CENPHQ9H3R5 247 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 STARD13Q9Y3M8 1113 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 SLC7A4O43246 635 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-203ENST00000477626 CD9P21926 228 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 ELF1P32519 619 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 CDK18Q07002 472 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 MESP2Q0VG99 397 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 PEX6Q13608 980 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 MPPE1Q53F39 396 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 KIAA0408Q6ZU52 694 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 RAB3IL1Q8TBN0 382 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 CCT6BQ92526 530 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 RHOJQ9H4E5 214 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 SNX15Q9NRS6 342 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.45
PRPF39-203ENST00000477626 NDST3O95803 873 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 SLC12A1Q13621 1099 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 POU6F1Q14863 301 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 PTPRRQ15256 657 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 ZSCAN26Q16670 478 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 PLEKHG6Q3KR16 790 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 RASSF3Q86WH2 238 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 TNS4Q8IZW8 715 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 BRSK1Q8TDC3 778 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 C10orf82Q8WW14 230 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 ZNF75CPQ92670 426 aaPredicted RBP12.21□□□□□ -0.46
PRPF39-203ENST00000477626 SORT1Q99523 831 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 LBHD1Q9BQE6 289 aaPredicted RBP12.21□□□□□ -0.46
PRPF39-203ENST00000477626 ZMYM5Q9UJ78 669 aa12.21□□□□□ -0.46
PRPF39-203ENST00000477626 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 BIRC5O15392 142 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 PMPCBO75439 489 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 OXCT1P55809 520 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ZNF177Q13360 481 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ITIH4Q14624 930 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 HSP90AA5PQ58FG0 334 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 PPM1JQ5JR12 505 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 BCAS4Q8TDM0 211 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 PABPC5Q96DU9 382 aaKnown RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 SMC6Q96SB8 1091 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 KLF6Q99612 283 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 OMDQ99983 421 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ARL5AQ9Y689 179 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 HEATR9A2RTY3 570 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 SRCP12931 536 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ALOX15P16050 662 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 MPP1Q00013 466 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 IRF9Q00978 393 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 GRM3Q14832 879 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 GPR158Q5T848 1215 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 LVRNQ6Q4G3 990 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 C12orf40Q86WS4 652 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ACDQ96AP0 544 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 OLFM1Q99784 485 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 TDP1Q9NUW8 608 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 C10orf142B7Z368 130 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 SPINT1O43278 529 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 PLIN3O60664 434 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 GM2AP17900 193 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 ETFBP38117 255 aa12.2□□□□□ -0.46
PRPF39-203ENST00000477626 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms