RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SIM1P81133 766 aaPredicted RBP17.83■□□□□ 0.45
PTPN7-209ENST00000477554 GBE1Q04446 702 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 LLGL1Q15334 1064 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 SETMARQ53H47 684 aaPredicted RBP17.83■□□□□ 0.45
PTPN7-209ENST00000477554 C11orf63Q6NUN7 778 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 DBX2Q6ZNG2 339 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 B4GALNT4Q76KP1 1039 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 DAAM2Q86T65 1068 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 SRLQ86TD4 932 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 TTC7BQ86TV6 843 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 PNPLA1Q8N8W4 532 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 SETD7Q8WTS6 366 aaKnown RBP17.83■□□□□ 0.45
PTPN7-209ENST00000477554 FUBP1Q96AE4 644 aaKnown RBP17.83■□□□□ 0.45
PTPN7-209ENST00000477554 SMIM14Q96QK8 99 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 NCAPGQ9BPX3 1015 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 SLC17A9Q9BYT1 436 aa17.83■□□□□ 0.45
PTPN7-209ENST00000477554 TDRD6O60522 2096 aaKnown RBP17.83■□□□□ 0.44
PTPN7-209ENST00000477554 A0A0U1RQS6 177 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 A0A1B0GTQ1 180 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 AP1G1O43747 822 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 SDC3O75056 442 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 TUBB4AP04350 444 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 MAN1A1P33908 653 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 SLC1A1P43005 524 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 SCNN1BP51168 640 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 LBRQ14739 615 aaKnown RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 IL27RAQ6UWB1 636 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 MFSD2AQ8NA29 543 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 KCTD6Q8NC69 237 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 BAHD1Q8TBE0 780 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 FAF2Q96CS3 445 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 ELF4Q99607 663 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 CINPQ9BW66 212 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 CPEB1Q9BZB8 566 aaKnown RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 SUV39H2Q9H5I1 410 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 PNMA8BQ9ULN7 279 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-209ENST00000477554 CAPN6Q9Y6Q1 641 aa17.82■□□□□ 0.44
PTPN7-209ENST00000477554 GRID2IPA4D2P6 1211 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 GOLGA8CPA6NN73 597 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PRAMEF26H0Y7S4 382 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 KIF2AO00139 706 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 THEGLP0DJG4 465 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 COMTP21964 271 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 HNRNPA2B1P22626 353 aaKnown RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 KDELR1P24390 212 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 MARCKSL1P49006 195 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF135P52742 658 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 FOXC1Q12948 553 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 SLC14A1Q13336 389 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 STAT4Q14765 748 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF542PQ5EBM4 170 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF569Q5MCW4 686 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 NPNTQ6UXI9 565 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 SLCO6A1Q86UG4 719 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 LZTR1Q8N653 840 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 C1QTNF2Q9BXJ5 285 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 OSBPL1AQ9BXW6 950 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PCDH12Q9NPG4 1184 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 MBNL1Q9NR56 388 aaKnown RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 TOR4AQ9NXH8 423 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 DMTF1Q9Y222 760 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 TSPAN11A1L157 253 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 A8MX80 341 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 TRAFD1O14545 582 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF500O60304 480 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ZNF883P0CG24 379 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 CR2P20023 1033 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 CCT8P50990 548 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 GNG11P61952 73 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 RPS21P63220 83 aaKnown RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 FOXK2Q01167 660 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PAFAH1B3Q15102 231 aaKnown RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 TRIP6Q15654 476 aaKnown RBP17.81■□□□□ 0.44
PTPN7-209ENST00000477554 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 NEK5Q6P3R8 708 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 KANSL1Q7Z3B3 1105 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 MARCH9Q86YJ5 346 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ATPAF2Q8N5M1 289 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PLD5Q8N7P1 536 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 LRRC57Q8N9N7 239 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 SAP25Q8TEE9 199 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 FEM1CQ96JP0 617 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PSKH2Q96QS6 385 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 NOD2Q9HC29 1040 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 DKK3Q9UBP4 350 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 KLF15Q9UIH9 416 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 PCDHGC4Q9Y5F7 938 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 ALG6Q9Y672 507 aa17.81■□□□□ 0.44
PTPN7-209ENST00000477554 NEMP1O14524 444 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 ATXN1LP0C7T5 689 aaKnown RBP17.8■□□□□ 0.44
PTPN7-209ENST00000477554 GM2AP17900 193 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 ADCY2Q08462 1091 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 GALNT2Q10471 571 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 UGP2Q16851 508 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 KIAA1161Q6NSJ0 714 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 Q6ZSR6 202 aa17.8■□□□□ 0.44
PTPN7-209ENST00000477554 ABI3BPQ7Z7G0 1075 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms