RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MT-CYBP00156 380 aaPredicted RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 ZSCAN5DPP0CG00 497 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 ETS1P14921 441 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 SLC8A1P32418 973 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 VPS41P49754 854 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 SKOR1P84550 965 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PRPSAP1Q14558 356 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 TRIP13Q15645 432 aaPredicted RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 SLC14A2Q15849 920 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PCSK7Q16549 785 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 KCTD19Q17RG1 926 aaPredicted RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 ZNF805Q5CZA5 627 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PRPF39Q86UA1 669 aaKnown RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 AADATQ8N5Z0 425 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 GANCQ8TET4 914 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PDCD6IPQ8WUM4 868 aaKnown RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 ARRDC3Q96B67 414 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 OXNAD1Q96HP4 312 aaPredicted RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 ZNF641Q96N77 438 aaPredicted RBP15.46■□□□□ 0.07
SEC13-215ENST00000477547 KLHL32Q96NJ5 620 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PPP1R2P1Q96PQ5 205 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 KRT12Q99456 494 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 GORASP1Q9BQQ3 440 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 CD93Q9NPY3 652 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 UBP1Q9NZI7 540 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PCYOX1Q9UHG3 505 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 SCML1Q9UN30 329 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 PCDHGC4Q9Y5F7 938 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 RAI2Q9Y5P3 530 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 CFAP47Q6ZTR5 3102 aa15.46■□□□□ 0.07
SEC13-215ENST00000477547 THADAQ6YHU6 1953 aa15.46■□□□□ 0.06
SEC13-215ENST00000477547 TSPAN11A1L157 253 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 PLK4O00444 970 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 AXIN1O15169 862 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 PMPCBO75439 489 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 RNASEH2AO75792 299 aaKnown RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 ANXA9O76027 345 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 CPP00450 1065 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 KRT14P02533 472 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 TDGF1P13385 188 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 RPL22P35268 128 aaKnown RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 DRD3P35462 400 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 NEK3P51956 506 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 GEMP55040 296 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 DR1Q01658 176 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 CSTF1Q05048 431 aaKnown RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 DMWDQ09019 674 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 IHHQ14623 411 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 PPP1R7Q15435 360 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 MAML2Q8IZL2 1156 aaPredicted RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 HDDC3Q8N4P3 179 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 MNS1Q8NEH6 495 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 IPMKQ8NFU5 416 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 SLCO2A1Q92959 643 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 OMDQ99983 421 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 MLPHQ9BV36 600 aaPredicted RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 SUV39H2Q9H5I1 410 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 VPS45Q9NRW7 570 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 USP36Q9P275 1121 aaKnown RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 SERGEFQ9UGK8 458 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 EBF1Q9UH73 591 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 FAM153AQ9UHL3 310 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 FEZ2Q9UHY8 353 aaPredicted RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 FBXO4Q9UKT5 387 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 TRPM6Q9BX84 2022 aa15.45■□□□□ 0.06
SEC13-215ENST00000477547 TNRC6BQ9UPQ9 1833 aaKnown RBP15.45■□□□□ 0.06
SEC13-215ENST00000477547 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 GOLGA6BA6NDN3 693 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 TRAFD1O14545 582 aaPredicted RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 HTRA2O43464 458 aaPredicted RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 METTL18O95568 372 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 C7P10643 843 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 HOXA6P31267 233 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 FDFT1P37268 417 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 FNTBP49356 437 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 BASP1P80723 227 aaKnown RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 CNTN1Q12860 1018 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 MPP3Q13368 585 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 PTK6Q13882 451 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 DHX34Q14147 1143 aaKnown RBP15.44■□□□□ 0.06
SEC13-215ENST00000477547 PARP6Q2NL67 630 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 LRRC73Q5JTD7 316 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 ARMC12Q5T9G4 340 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 BRAT1Q6PJG6 821 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 KDELC1Q6UW63 502 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 C4orf22Q6V702 233 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 USP30Q70CQ3 517 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 JAMLQ86YT9 394 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 TADA1Q96BN2 335 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 FSD1LQ9BXM9 530 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 RAB6BQ9NRW1 208 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 FBXL12Q9NXK8 326 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 DKK3Q9UBP4 350 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 ASIC3Q9UHC3 531 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 CYP8B1Q9UNU6 501 aa15.44■□□□□ 0.06
SEC13-215ENST00000477547 DOCK9Q9BZ29 2069 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms