RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
HDLBP-236ENST00000477477 TDRD6O60522 2096 aaKnown RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 A0A1W2PNU3 283 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 TSPAN11A1L157 253 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 MUSKO15146 869 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 FGF10O15520 208 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 TCEA3O75764 348 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 C1QL1O75973 258 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 PIGNO95427 931 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ANXA6P08133 673 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 TSHRP16473 764 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 XPAP23025 273 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 HTR7P34969 479 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 RPIAP49247 311 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ADKP55263 362 aaKnown RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 PPARDQ03181 441 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 UBXN1Q04323 297 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ELP6Q0PNE2 266 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 C19orf57Q0VDD7 668 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 CYTH1Q15438 398 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 WSCD2Q2TBF2 565 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 TMEM52BQ4KMG9 183 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 C3orf38Q5JPI3 329 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 DCUN1D2Q6PH85 259 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 RBM44Q6ZP01 1051 aaKnown RBP11.48□□□□□ -0.57
HDLBP-236ENST00000477477 DNAAF5Q86Y56 855 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 MCOLN2Q8IZK6 566 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 HCAR2Q8TDS4 363 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 NAT6Q93015 286 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ATXN7L3BQ96GX2 97 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 VCPIP1Q96JH7 1222 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 CLPBQ9H078 707 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 SATB2Q9UPW6 733 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 COQ6Q9Y2Z9 468 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 ENTPD2Q9Y5L3 495 aa11.48□□□□□ -0.57
HDLBP-236ENST00000477477 LRRC10BA6NIK2 292 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 YY2O15391 372 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 PRAMEF11O60813 436 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-236ENST00000477477 C6P13671 934 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 DESP17661 470 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 PEX5P50542 639 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 BLKP51451 505 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 HK3P52790 923 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 NDST2P52849 883 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 UCNP55089 124 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 TPI1P60174 286 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 OGDHQ02218 1023 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 GRM3Q14832 879 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 NFATC4Q14934 902 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 LRRC14Q15048 493 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 UGP2Q16851 508 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 BROXQ5VW32 411 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 SASS6Q6UVJ0 657 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 APTXQ7Z2E3 356 aaKnown RBP11.47□□□□□ -0.57
HDLBP-236ENST00000477477 FSTL5Q8N475 847 aaPredicted RBP11.47□□□□□ -0.57
HDLBP-236ENST00000477477 WDR48Q8TAF3 677 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 KCNE4Q8WWG9 221 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 SUV39H2Q9H5I1 410 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 GPATCH2LQ9NWQ4 482 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 DONSONQ9NYP3 566 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 PCDHGA8Q9Y5G5 932 aa11.47□□□□□ -0.57
HDLBP-236ENST00000477477 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 TMEM110-MUSTN1A8MSY1 372 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 J3KR12 359 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 KLK10O43240 276 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 RASGRP1O95267 797 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 CCDC172P0C7W6 258 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 FERP16591 822 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 RBMS1P29558 406 aaKnown RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 MMP12P39900 470 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 PDX1P52945 283 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 TMPRSS3P57727 454 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 SKOR1P84550 965 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 NCAPHQ15003 741 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 AGERQ15109 404 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ELOCQ15369 112 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 STX1AQ16623 288 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ALG11Q2TAA5 492 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 CFAP58Q5T655 872 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ESRP1Q6NXG1 681 aaKnown RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ERAP2Q6P179 960 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 BRAT1Q6PJG6 821 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 PCSK4Q6UW60 755 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ZSWIM9Q86XI8 627 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ARL10Q8N8L6 244 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 PCDH19Q8TAB3 1148 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 TSACCQ96A04 125 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 PRR11Q96HE9 360 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 CELF6Q96J87 481 aaKnown RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 ZNF641Q96N77 438 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-236ENST00000477477 SLC46A1Q96NT5 459 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 TUBGCP5Q96RT8 1024 aa11.46□□□□□ -0.57
HDLBP-236ENST00000477477 CCDC3Q9BQI4 270 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms