RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ENTPD7Q9NQZ7 604 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 PACSIN3Q9UKS6 424 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 LOC100506127A0A0U1RQW1 187 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 AREL1O15033 823 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 KPNA5O15131 536 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 MDM4O15151 490 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TMCC2O75069 709 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CTSHP09668 335 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 NPR3P17342 541 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ACADLP28330 430 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TKTP29401 623 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 GPR15P49685 360 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 RGS1Q08116 209 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 FAAP100Q0VG06 881 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 QPRTQ15274 297 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TAF5Q15542 800 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 C5orf22Q49AR2 442 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 XKR5Q6UX68 686 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 C12orf43Q96C57 262 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SHOC2Q9UQ13 582 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 M0QYT0 321 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SULT1C4O75897 302 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SERPINA1P01009 418 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CKMP06732 381 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 PCNAP12004 261 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 RAB25P57735 213 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ARPC4P59998 168 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 MSANTD1Q6ZTZ1 278 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 R3HCC1LQ7Z5L2 792 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CHERPQ8IWX8 916 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 IQCF2Q8IXL9 164 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 OR7A2PQ8NGA2 310 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 REEP1Q9H902 201 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SORCS3Q9UPU3 1222 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SNX8Q9Y5X2 465 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SQORQ9Y6N5 450 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF142P52746 1687 aaPredicted RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CHURC1-FNTBB4DL54 471 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 F5H5T6 163 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TAS2R40P59535 323 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 DGCR6Q14129 220 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SAMD4BQ5PRF9 694 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CLYBLQ8N0X4 340 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TCAIMQ8N3R3 496 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 FBXO36Q8NEA4 188 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TBC1D15Q8TC07 691 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ELL3Q9HB65 397 aaPredicted RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 AGPAT3Q9NRZ7 376 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 PSME2Q9UL46 239 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 MGAT4AQ9UM21 535 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 PSIP1O75475 530 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 GLP2RO95838 553 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 LRG1P02750 347 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 IDH2P48735 452 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 PPP3CAQ08209 521 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 INTS11Q5TA45 600 aaKnown RBP11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ANKRD22Q5VYY1 191 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ABRAXAS1Q6UWZ7 409 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 FRMD7Q6ZUT3 714 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 POC5Q8NA72 575 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 TMEM143Q96AN5 459 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 B3GALT6Q96L58 329 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SLC35C2Q9NQQ7 365 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 SIRPGQ9P1W8 387 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 KIAA1257Q9ULG3 409 aa11.59□□□□□ -0.55
U2AF1-209ENST00000475639 CCDC182A6NF36 153 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A9O60656 530 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ZMPSTE24O75844 475 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 MT-CO1P00395 513 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A6P19224 532 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A1P22309 533 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A4P22310 534 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 PTPN3P26045 913 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A3P35503 534 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 UGT1A5P35504 534 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 TAF6P49848 677 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 MRPS22P82650 360 aaKnown RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 CDK18Q07002 472 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 PDPK2PQ6A1A2 396 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 RASSF6Q6ZTQ3 369 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 STRA8Q7Z7C7 330 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
U2AF1-209ENST00000475639 ADCY4Q8NFM4 1077 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
U2AF1-209ENST00000475639 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms