RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 LEKR1Q6ZMV7 388 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 TAOK1Q7L7X3 1001 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 CNTN4Q8IWV2 1026 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 PPM1NQ8N819 430 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 SH3RF2Q8TEC5 729 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 NANOS1Q8WY41 292 aaKnown RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 GLMNQ92990 594 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 ISL2Q96A47 359 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 PABPC5Q96DU9 382 aaKnown RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 CERS2Q96G23 380 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 ABHD8Q96I13 439 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 FEM1CQ96JP0 617 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 LRRC3BQ96PB8 259 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 SEMA3CQ99985 751 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 LHX3Q9UBR4 397 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 UBA2Q9UBT2 640 aaPredicted RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 SEPT3Q9UH03 358 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 ZMYM5Q9UJ78 669 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
ITGA6-210ENST00000475302 TCAF1Q9Y4C2 921 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 PSAT1Q9Y617 370 aa9.77□□□□□ -0.85
ITGA6-210ENST00000475302 MYLKQ15746 1914 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 IQANK1A0A1B0GTG1 560 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 CCDC195A0A1B0GUA6 201 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 MROH6A6NGR9 719 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 LDB2O43679 373 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ATP9BO43861 1147 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ZNF821O75541 412 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 PAPSS2O95340 614 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ASMTLO95671 621 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 DHRS4L1P0CG22 281 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 CES1P23141 567 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ADRA1DP25100 572 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ETFBP38117 255 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 CSKP41240 450 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 ETV4P43268 484 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 NEK3P51956 506 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 NSUN2Q08J23 767 aaKnown RBP eCLIP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 DNAJC3Q13217 504 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 SIRPB2Q5JXA9 342 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 IL31Q6EBC2 164 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 PACS1Q6VY07 963 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 GRASPQ7Z6J2 395 aaPredicted RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 APCDD1Q8J025 514 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 DNAAF3Q8N9W5 541 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 DCAF4L2Q8NA75 395 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 TDRD5Q8NAT2 981 aaKnown RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 NSMCE1Q8WV22 266 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 RSPRY1Q96DX4 576 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 MRRFQ96E11 262 aaKnown RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 NUDCD1Q96RS6 583 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 POLR1EQ9GZS1 481 aaKnown RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 EPN3Q9H201 632 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 NOD2Q9HC29 1040 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 MARK1Q9P0L2 795 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 SLC17A6Q9P2U8 582 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 VPS51Q9UID3 782 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 LSM7Q9UK45 103 aaKnown RBP9.76□□□□□ -0.85
ITGA6-210ENST00000475302 SH3BP1Q9Y3L3 701 aa9.76□□□□□ -0.85
ITGA6-210ENST00000475302 MKI67P46013 3256 aaKnown RBP9.75□□□□□ -0.85
ITGA6-210ENST00000475302 FAM47DPA6NHR8 397 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 TRIM49D1C9J1S8 452 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 FZD6O60353 706 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 XYLBO75191 536 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CSPG5O95196 566 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 MT-CO1P00395 513 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 INHBAP08476 426 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 SNRPAP09012 282 aaKnown RBP9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CEBPBP17676 345 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 KRT4P19013 534 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 GABRB3P28472 473 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CD70P32970 193 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 SERPINB9P50453 376 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 SERPINH1P50454 418 aaKnown RBP9.75□□□□□ -0.85
ITGA6-210ENST00000475302 SEC24CP53992 1094 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 PPARDQ03181 441 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CDK18Q07002 472 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 LMAN2Q12907 356 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 ESRP1Q6NXG1 681 aaKnown RBP9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CASC4Q6P4E1 433 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 NCEH1Q6PIU2 408 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CDHR3Q6ZTQ4 885 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 TMEM25Q86YD3 366 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CTAGE3PQ8IX95 158 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 ADGRG2Q8IZP9 1017 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 C4orf33Q8N1A6 199 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 DEPDC4Q8N2C3 294 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CARNMT1Q8N4J0 409 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.75□□□□□ -0.85
ITGA6-210ENST00000475302 ITFG1Q8TB96 612 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 CKAP2Q8WWK9 683 aa9.75□□□□□ -0.85
ITGA6-210ENST00000475302 ZNF669Q96BR6 464 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms