RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 WARSP23381 471 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 RAB10P61026 200 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 DDR1Q08345 913 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 UGCGQ16739 394 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 TSHZ1Q6ZSZ6 1077 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 RASAL3Q86YV0 1011 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 C10orf107Q8IVU9 208 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 C1QTNF3-AMACRE9PGA6 284 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 TLR5O60602 858 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 RAPSNQ13702 412 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 INO80DQ53TQ3 878 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 C8orf59Q8N0T1 100 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 GOLGA2P5Q9HBQ8 144 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 KCNK4Q9NYG8 393 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 TMEM216Q9P0N5 145 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ASF1AQ9Y294 204 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 RECQL5O94762 991 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 ADSLP30566 484 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 AFTPHQ6ULP2 937 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 NKAPQ8N5F7 415 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 CCDC185Q8N715 623 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 PHF10Q8WUB8 498 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 COQ7Q99807 217 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 MORF4L1Q9UBU8 362 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 MLYCDO95822 493 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ALADP13716 330 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 HGFP14210 728 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 IL12RB1P42701 662 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 ARF5P84085 180 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 KLHL12Q53G59 568 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 DSELQ8IZU8 1212 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 KCNMB3Q9NPA1 279 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 BRCC3P46736 316 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 ITGADQ13349 1161 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TTMPQ5BVD1 217 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TREML2Q5T2D2 321 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 ZBTB46Q86UZ6 589 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 FAM71AQ8IYT1 594 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.64
VAPB-204ENST00000475243 RHOBTB2Q9BYZ6 727 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 CAB39LQ9H9S4 337 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 IKZF3Q9UKT9 509 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3DA0A087WVF3 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3IA0A087WXS9 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3EA0A087X179 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3KA0A087X1G2 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3FA6NER0 549 aaPredicted RBP11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3LB9A6J9 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TEX28O15482 410 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 IDH3BO43837 385 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 CYP3A4P08684 503 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3HP0C7X1 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 GABRR2P28476 465 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 EPHA3P29320 983 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 MC4RP32245 332 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 OR1D2P34982 312 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 NAB1Q13506 487 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3GQ6DHY5 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3CQ6IPX1 549 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 UNC93AQ86WB7 457 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 TBC1D3Q8IZP1 549 aaPredicted RBP11.02□□□□□ -0.64
VAPB-204ENST00000475243 LRRC39Q96DD0 335 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 KLHL5Q96PQ7 755 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 CLN6Q9NWW5 311 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 CIDEBQ9UHD4 219 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 ZNF780BQ9Y6R6 833 aa11.02□□□□□ -0.64
VAPB-204ENST00000475243 FTH1P02794 183 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 CYP1A2P05177 515 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 CYP4B1P13584 511 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ERCC2P18074 760 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 GTF2BQ00403 316 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 SPIBQ01892 262 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 POMZP3Q6PJE2 187 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 MSI1O43347 362 aaKnown RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 RCVRNP35243 200 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 PSMD5Q16401 504 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 UROC1Q96N76 676 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 EHD3Q9NZN3 535 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 SLC28A2O43868 658 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ITGAVP06756 1048 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 ELFN1P0C7U0 828 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 LPOP22079 712 aaPredicted RBP11.02□□□□□ -0.65
VAPB-204ENST00000475243 MYBPC1Q00872 1141 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 GPRIN3Q6ZVF9 776 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 RAD51AP1Q96B01 352 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 CRISPLD1Q9H336 500 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 EQTNQ9NQ60 294 aa11.02□□□□□ -0.65
VAPB-204ENST00000475243 KIAA1210Q9ULL0 1709 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms