RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 GPR161Q8N6U8 529 aaKnown RBP17.08■□□□□ 0.32
SCAF11-206ENST00000474828 CEP76Q8TAP6 659 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
SCAF11-206ENST00000474828 ARRDC1-AS1Q9H2J1 176 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 CAPN10Q9HC96 672 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 PARD6AQ9NPB6 346 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 VPS45Q9NRW7 570 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 TRHDEQ9UKU6 1024 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 ZFR2Q9UPR6 939 aaKnown RBP17.08■□□□□ 0.32
SCAF11-206ENST00000474828 DMTF1Q9Y222 760 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.32
SCAF11-206ENST00000474828 RIF1Q5UIP0 2472 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 TTC24A2A3L6 582 aaPredicted RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 KCNK3O14649 394 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PGLSO95336 258 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PRLP01236 227 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 RBP3P10745 1247 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 RPL26P61254 145 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PPP2CBP62714 309 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 POLR2LP62875 67 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PPP2CAP67775 309 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 SKOR1P84550 965 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 DSC2Q02487 901 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 CREB5Q02930 508 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 DRICH1Q6PGQ1 229 aaPredicted RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 TTC7BQ86TV6 843 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 ZC3H18Q86VM9 953 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 CDKL3Q8IVW4 592 aaPredicted RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PIH1D2Q8WWB5 315 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 HAUS1Q96CS2 278 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 RTP4Q96DX8 246 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 C1QTNF2Q9BXJ5 285 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 TDRD1Q9BXT4 1180 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 GLOD4Q9HC38 313 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 TRMT1Q9NXH9 659 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 SUSD2Q9UGT4 822 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 RPL26L1Q9UNX3 145 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 R3HDM2Q9Y2K5 976 aaKnown RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 ZKSCAN5Q9Y2L8 839 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 PCDHGC4Q9Y5F7 938 aa17.07■□□□□ 0.32
SCAF11-206ENST00000474828 EP300Q09472 2414 aaPredicted RBP17.07■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3DA0A087WVF3 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3IA0A087WXS9 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3EA0A087X179 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3KA0A087X1G2 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3FA6NER0 549 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3LB9A6J9 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 CES2O00748 559 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 KIF5CO60282 957 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 RNGTTO60942 597 aaKnown RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 SERPINF2P08697 491 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3HP0C7X1 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 RBL1P28749 1068 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 MMP12P39900 470 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 RPS21P63220 83 aaKnown RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 ELP6Q0PNE2 266 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 ZNF569Q5MCW4 686 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 SEL1L2Q5TEA6 688 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3GQ6DHY5 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3CQ6IPX1 549 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TBC1D3Q8IZP1 549 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 ZNF567Q8N184 647 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TMEM145Q8NBT3 493 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 LENG8Q96PV6 779 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-206ENST00000474828 FCRL5Q96RD9 977 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 TRIB3Q96RU7 358 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 NCDNQ9UBB6 729 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 PHTF1Q9UMS5 762 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 RAI2Q9Y5P3 530 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 SLCO1B1Q9Y6L6 691 aa17.06■□□□□ 0.32
SCAF11-206ENST00000474828 CFAP54Q96N23 3096 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 A0A1B0GTW7 788 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 A0A1W2PQU0 124 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 C5orf60A6NFR6 353 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 PRR5-ARHGAP8B1AHC4 643 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
SCAF11-206ENST00000474828 RALGDSQ12967 914 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 CCDC181Q5TID7 509 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 B4GALNT4Q76KP1 1039 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 ARMCX6Q7L4S7 300 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 DCLK2Q8N568 766 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 PIGKQ92643 395 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 PBKQ96KB5 322 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 AGAP3Q96P47 875 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 LYSMD1Q96S90 227 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 PCDH12Q9NPG4 1184 aa17.05■□□□□ 0.32
SCAF11-206ENST00000474828 EIF2B4Q9UI10 523 aaKnown RBP17.05■□□□□ 0.32
SCAF11-206ENST00000474828 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
SCAF11-206ENST00000474828 A0A1W2PR77 199 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms