RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 NKD1Q969G9 470 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
TRIM13-207ENST00000474805 GSDMAQ96QA5 445 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 APOOQ9BUR5 198 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 ZNF71Q9NQZ8 489 aaPredicted RBP12.55□□□□□ -0.4
TRIM13-207ENST00000474805 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.45e-8■■□□□ 12
TRIM13-207ENST00000474805 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 PAXBP1Q9Y5B6 917 aa12.55□□□□□ -0.4
TRIM13-207ENST00000474805 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 STMND1H3BQB6 276 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 POP4O95707 220 aaKnown RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 F9P00740 461 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 TNFP01375 233 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 LIFP15018 202 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 TIMP2P16035 220 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 PNLIPP16233 465 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 HTR1BP28222 390 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 CCR10P46092 362 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 ARSDP51689 593 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 INPP5AQ14642 412 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 LRRC14Q15048 493 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 POLD3Q15054 466 aaPredicted RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 WSCD2Q2TBF2 565 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 PTPN20Q4JDL3 420 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 ATXN7L2Q5T6C5 722 aaPredicted RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 FAM46DQ8NEK8 389 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 ZNF397Q8NF99 534 aaPredicted RBP12.54□□□□□ -0.4
TRIM13-207ENST00000474805 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 PMEPA1Q969W9 287 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 CCDC34Q96HJ3 373 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 TBCBQ99426 244 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 RDH14Q9HBH5 336 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 NDFIP2Q9NV92 336 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 RRN3Q9NYV6 651 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 KLQ9UEF7 1012 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 ANAPC2Q9UJX6 822 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 STAP1Q9ULZ2 295 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 PLAAQ9Y263 795 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 OR1A2Q9Y585 309 aa12.54□□□□□ -0.4
TRIM13-207ENST00000474805 FAM170AA1A519 330 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 PSMA7O14818 248 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 B4GAT1O43505 415 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 GSRP00390 522 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 ATP1A2P50993 1020 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 NFATC4Q14934 902 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 TAF8Q7Z7C8 310 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 NETO2Q8NC67 525 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 ARHGEF2Q92974 986 aaKnown RBP12.53□□□□□ -0.4
TRIM13-207ENST00000474805 SNX21Q969T3 373 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
TRIM13-207ENST00000474805 PDXPQ96GD0 296 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
TRIM13-207ENST00000474805 RBM15Q96T37 977 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 20.5
TRIM13-207ENST00000474805 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 TUBD1Q9UJT1 453 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
TRIM13-207ENST00000474805 B4DGG1 531 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
TRIM13-207ENST00000474805 SNX16P57768 344 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 B4GALNT1Q00973 533 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 APBA1Q02410 837 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 STIM1Q13586 685 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRIM13-207ENST00000474805 SLC25A52Q3SY17 297 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 AMZ1Q400G9 498 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 C14orf28Q4W4Y0 310 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 EFHC2Q5JST6 749 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 KLHL10Q6JEL2 608 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 TTI2Q6NXR4 508 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 ENOSF1Q7L5Y1 443 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 PIM3Q86V86 326 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.41
TRIM13-207ENST00000474805 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 TAAR9Q96RI9 348 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 DPEP2Q9H4A9 486 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
TRIM13-207ENST00000474805 MRPL40Q9NQ50 206 aaKnown RBP12.52□□□□□ -0.41
TRIM13-207ENST00000474805 AKAP7Q9P0M2 348 aaPredicted RBP12.52□□□□□ -0.41
TRIM13-207ENST00000474805 DNAI1Q9UI46 699 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms