RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 FAF2Q96CS3 445 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 BMFQ96LC9 184 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 ZNF641Q96N77 438 aaPredicted RBP16.15■□□□□ 0.18
ITGB1-210ENST00000474568 TUBGCP5Q96RT8 1024 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 C1QTNF2Q9BXJ5 285 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 SCUBE2Q9NQ36 999 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 PCDHGC4Q9Y5F7 938 aa16.15■□□□□ 0.18
ITGB1-210ENST00000474568 TSPAN11A1L157 253 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 A6NNZ2 444 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 A8MX80 341 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 DFNA5O60443 496 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 CBFA2T3O75081 653 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 EPHA8P29322 1005 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-210ENST00000474568 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
ITGB1-210ENST00000474568 ARRB1P49407 418 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-210ENST00000474568 AP1S1P61966 158 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 DYNLT1P63172 113 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 ITKQ08881 620 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 NSUN2Q08J23 767 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGB1-210ENST00000474568 GALNT2Q10471 571 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 LLGL1Q15334 1064 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 CCDC157Q569K6 752 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 MARC1Q5VT66 337 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 ERAP2Q6P179 960 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 RAD9BQ6WBX8 426 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 RFX6Q8HWS3 928 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 SLC22A18ASQ8N1D0 253 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-210ENST00000474568 RNF157Q96PX1 679 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 NOD2Q9HC29 1040 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 ATP8A1Q9Y2Q0 1164 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 TTLL3Q9Y4R7 772 aa16.14■□□□□ 0.17
ITGB1-210ENST00000474568 C3orf70A6NLC5 250 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 FPGTO14772 594 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 PCDHGA12O60330 932 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 TM7SF2O76062 418 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 NDUFA10O95299 355 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 LCA5LO95447 670 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 SLC1A1P43005 524 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 GRK6P43250 576 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 ELP6Q0PNE2 266 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 OVGP1Q12889 678 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 SLC10A2Q12908 348 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 TMEM52BQ4KMG9 183 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 NPNTQ6UXI9 565 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 DBX2Q6ZNG2 339 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 ABI3BPQ7Z7G0 1075 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 TMTC1Q8IUR5 882 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 EID2Q8N6I1 236 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 ACRBPQ8NEB7 543 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 SAP25Q8TEE9 199 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 NUDCD1Q96RS6 583 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 KLF6Q99612 283 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 MGME1Q9BQP7 344 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 ANP32EQ9BTT0 268 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 MAK16Q9BXY0 300 aaKnown RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 MBNL1Q9NR56 388 aaKnown RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 DTLQ9NZJ0 730 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 ANGPTL2Q9UKU9 493 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 HEY1Q9Y5J3 304 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 HS3ST3A1Q9Y663 406 aa16.13■□□□□ 0.17
ITGB1-210ENST00000474568 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-210ENST00000474568 RCCD1A6NED2 376 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 TRAFD1O14545 582 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 RIOK3O14730 519 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 APOL1O14791 398 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 HYAL3O43820 417 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 NEBLO76041 1014 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 ATXN1LP0C7T5 689 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 FTH1P19P0C7X4 201 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 C6P13671 934 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 CR2P20023 1033 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 IGFALSP35858 605 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 HSPA9P38646 679 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 MMP12P39900 470 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 LIG3P49916 1009 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 TRAF2Q12933 501 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 PDE1CQ14123 709 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 TCEAL1Q15170 157 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 TPRG1LQ5T0D9 272 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 MFSD7Q6UXD7 560 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 KYAT3Q6YP21 454 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 B4GALNT4Q76KP1 1039 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 OXR1Q8N573 874 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 PLD5Q8N7P1 536 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 HCAR2Q8TDS4 363 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 ECHDC3Q96DC8 303 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 ERVMER34-1Q9H9K5 563 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 LUC7LQ9NQ29 371 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 RBM22Q9NW64 420 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■■■■■ 30.7
ITGB1-210ENST00000474568 REXO2Q9Y3B8 237 aaKnown RBP16.12■□□□□ 0.17
ITGB1-210ENST00000474568 ALG6Q9Y672 507 aa16.12■□□□□ 0.17
ITGB1-210ENST00000474568 DOCK9Q9BZ29 2069 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms