RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SLC35C2Q9NQQ7 365 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CACNA2D2Q9NY47 1150 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TNFRSF10DQ9UBN6 386 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 HRH3Q9Y5N1 445 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FADS3Q9Y5Q0 445 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 PSAT1Q9Y617 370 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TONSLQ96HA7 1378 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC15A5A6NIM6 579 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 IQCF5A8MTL0 148 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ERVV-2B6SEH9 535 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 H3BNC9 293 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CTIFO43310 598 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SSX5O60225 188 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ECE2O60344 883 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FBXO24O75426 580 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RHBDL1O75783 438 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SUPT20HL2P0C7V6 817 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CPA1P15085 419 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TFE3P19532 575 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 AHCYP23526 432 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC5A2P31639 672 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 HNRNPH1P31943 449 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GRK5P34947 590 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC15A1P46059 708 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ANXA11P50995 505 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC7A2P52569 658 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SULT2A1Q06520 285 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 KLC1Q07866 573 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GRM2Q14416 872 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RAB30Q15771 203 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 MCMDC2Q4G0Z9 681 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 NHSL2Q5HYW2 709 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ERMARDQ5T6L9 678 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 SARM1Q6SZW1 724 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LINC00696Q6ZRV3 163 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CHST3Q7LGC8 479 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ARMC8Q8IUR7 673 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 LINC00528Q8N1L1 170 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RNF152Q8N8N0 203 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 OR6J1Q8NGC5 347 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 JADE3Q92613 823 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 EDAQ92838 391 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CELF1Q92879 486 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 MR1Q95460 341 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 FBXO32Q969P5 355 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 C14orf79Q96F83 325 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 OR1F2PQ96R84 312 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 JPH2Q9BR39 696 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 RTKNQ9BST9 563 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TRIM54Q9BYV2 358 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GBA3Q9H227 469 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 TBC1D13Q9NVG8 400 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 DNAJB4Q9UDY4 337 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 MSRAQ9UJ68 235 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 GGA1Q9UJY5 639 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 CORO1CQ9ULV4 474 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 PPIL1Q9Y3C6 166 aa6.16□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD31Q8N7Z5 1873 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RIC1Q4ADV7 1423 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 C5orf42Q9H799 3197 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 BLACEA4D250 179 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM8BA6NDV4 472 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TTLL8A6PVC2 850 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 PRR23D1E9PI22 279 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF197O14709 1029 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 STX10O60499 249 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RPS6KA5O75582 802 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CIAO1O76071 339 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SEMA3DO95025 777 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 MFN2O95140 757 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 AKR7A3O95154 331 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 LCA5LO95447 670 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 A1BGP04217 495 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 IGFBP1P08833 259 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 PRR23D2P0DMB1 279 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 RPS12P25398 132 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 HTR1BP28222 390 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ABCD3P28288 659 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 AVPR2P30518 371 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CORO1AP31146 461 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 CDKN1BP46527 198 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 LSSP48449 732 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC11A1P49279 550 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 POLGP54098 1239 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 UBE2HP62256 183 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 KRT76Q01546 638 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC12A1Q13621 1099 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 MPP2Q14168 576 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 TBCEQ15813 527 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 MEP1BQ16820 701 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD20A4Q4UJ75 823 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD20A8PQ5CZ79 823 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD20A2Q5SQ80 823 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 SFRP5Q5T4F7 317 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD20A1Q5TYW2 823 aa6.15□□□□□ -1.42
SMARCE1-208ENST00000474246 IL23RQ5VWK5 629 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms